Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chchd1Q9CQA6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Etf1-202ENSMUST00000180351 108 ntBASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chchd1Q9CQA6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chchd1Q9CQA6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chchd1Q9CQA6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Serp2-204ENSMUST00000228055 705 ntBASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chchd1Q9CQA6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Chchd1Q9CQA6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chchd1Q9CQA6 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms