Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Kdm1aQ6ZQ88 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Kdm1aQ6ZQ88 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Kdm1aQ6ZQ88 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kdm1aQ6ZQ88 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kdm1aQ6ZQ88 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Gm5408-201ENSMUST00000197998 747 ntBASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kdm1aQ6ZQ88 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kdm1aQ6ZQ88 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Kdm1aQ6ZQ88 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms