Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.27■□□□□ 0.04
Shisa3Q3UPR0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa3Q3UPR0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa3Q3UPR0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa3Q3UPR0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa3Q3UPR0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Gm27405-201ENSMUST00000184201 112 ntBASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Gm7291-201ENSMUST00000199147 382 ntBASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms