Protein–RNA interactions for Protein: Q02948

VPS30, Vacuolar protein sorting-associated protein 30, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS30Q02948 YKL183C-AYKL183C-A 213 nt3.16□□□□□ -1.9
VPS30Q02948 YBR085C-AYBR085C-A 258 nt3.16□□□□□ -1.9
VPS30Q02948 PSY2YNL201C 2577 nt3.16□□□□□ -1.9
VPS30Q02948 PUF6YDR496C 1971 nt3.16□□□□□ -1.9
VPS30Q02948 NPR3YHL023C 3441 nt3.16□□□□□ -1.9
VPS30Q02948 ECM5YMR176W 4236 nt3.15□□□□□ -1.9
VPS30Q02948 JSN1YJR091C 3276 nt3.15□□□□□ -1.9
VPS30Q02948 RPL40AYIL148W 387 nt3.15□□□□□ -1.91
VPS30Q02948 YOR050CYOR050C 348 nt3.15□□□□□ -1.91
VPS30Q02948 YOP1YPR028W 543 nt3.15□□□□□ -1.91
VPS30Q02948 SIP3YNL257C 3690 nt3.15□□□□□ -1.91
VPS30Q02948 RSE1YML049C 4086 nt3.14□□□□□ -1.91
VPS30Q02948 CDC20YGL116W 1833 nt3.14□□□□□ -1.91
VPS30Q02948 YPR203WYPR203W 309 nt3.14□□□□□ -1.91
VPS30Q02948 KEL2YGR238C 2649 nt3.14□□□□□ -1.91
VPS30Q02948 PFF1YBR074W 2931 nt3.13□□□□□ -1.91
VPS30Q02948 DAD4YDR320C-A 219 nt3.13□□□□□ -1.91
VPS30Q02948 RPL14BYHL001W 417 nt3.13□□□□□ -1.91
VPS30Q02948 YLR458WYLR458W 381 nt3.13□□□□□ -1.91
VPS30Q02948 RPS18BYML026C 441 nt3.13□□□□□ -1.91
VPS30Q02948 RPL20AYMR242C 519 nt3.13□□□□□ -1.91
VPS30Q02948 COG3YER157W 2406 nt3.13□□□□□ -1.91
VPS30Q02948 ITC1YGL133W 3795 nt3.13□□□□□ -1.91
VPS30Q02948 DYN1YKR054C 12279 nt3.13□□□□□ -1.91
VPS30Q02948 NPR1YNL183C 2373 nt3.12□□□□□ -1.91
VPS30Q02948 FRE2YKL220C 2136 nt3.12□□□□□ -1.91
VPS30Q02948 TMA10YLR327C 261 nt3.12□□□□□ -1.91
VPS30Q02948 YNL337WYNL337W 255 nt3.12□□□□□ -1.91
VPS30Q02948 ECM25YJL201W 1800 nt3.12□□□□□ -1.91
VPS30Q02948 SKT5YBL061C 2091 nt3.12□□□□□ -1.91
VPS30Q02948 SSE1YPL106C 2082 nt3.12□□□□□ -1.91
VPS30Q02948 YIL166CYIL166C 1629 nt3.11□□□□□ -1.91
VPS30Q02948 OSW7YFR039C 1533 nt3.11□□□□□ -1.91
VPS30Q02948 FUS1YCL027W 1539 nt3.11□□□□□ -1.91
VPS30Q02948 TIM11YDR322C-A 291 nt3.11□□□□□ -1.91
VPS30Q02948 CYC7YEL039C 342 nt3.11□□□□□ -1.91
VPS30Q02948 YER121WYER121W 345 nt3.11□□□□□ -1.91
VPS30Q02948 YJL015CYJL015C 285 nt3.11□□□□□ -1.91
VPS30Q02948 CCW14YLR390W-A 717 nt3.11□□□□□ -1.91
VPS30Q02948 NET1YJL076W 3570 nt3.11□□□□□ -1.91
VPS30Q02948 TRM2YKR056W 1920 nt3.11□□□□□ -1.91
VPS30Q02948 APC2YLR127C 2562 nt3.1□□□□□ -1.91
VPS30Q02948 tM(CAU)Q1tM(CAU)Q1 76 nt3.1□□□□□ -1.91
VPS30Q02948 TAR1YLR154W-C 375 nt3.1□□□□□ -1.91
VPS30Q02948 ASG1YIL130W 2895 nt3.1□□□□□ -1.91
VPS30Q02948 IRC10YOL015W 1761 nt3.1□□□□□ -1.91
VPS30Q02948 RSN1YMR266W 2862 nt3.09□□□□□ -1.91
VPS30Q02948 snR79snR79 84 nt3.09□□□□□ -1.91
VPS30Q02948 snR80snR80 171 nt3.09□□□□□ -1.91
VPS30Q02948 RPL35AYDL191W 363 nt3.09□□□□□ -1.91
VPS30Q02948 CSN9YDR179C 489 nt3.09□□□□□ -1.91
VPS30Q02948 YDR209CYDR209C 414 nt3.09□□□□□ -1.91
VPS30Q02948 ADK1YDR226W 669 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)G1tW(CCA)G1 72 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)G2tW(CCA)G2 72 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)JtW(CCA)J 72 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)KtW(CCA)K 72 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)MtW(CCA)M 72 nt3.09□□□□□ -1.91
VPS30Q02948 tW(CCA)PtW(CCA)P 72 nt3.09□□□□□ -1.91
VPS30Q02948 YKR033CYKR033C 426 nt3.09□□□□□ -1.91
VPS30Q02948 LCL1YPL056C 306 nt3.09□□□□□ -1.91
VPS30Q02948 NAN1YPL126W 2691 nt3.09□□□□□ -1.91
VPS30Q02948 FLO11YIR019C 4104 nt3.08□□□□□ -1.92
VPS30Q02948 SGO1YOR073W 1773 nt3.08□□□□□ -1.92
VPS30Q02948 NFT1YKR103W 3657 nt3.08□□□□□ -1.92
VPS30Q02948 snR70snR70 164 nt3.08□□□□□ -1.92
VPS30Q02948 MZM1YDR493W 372 nt3.08□□□□□ -1.92
VPS30Q02948 RPS24AYER074W 408 nt3.08□□□□□ -1.92
VPS30Q02948 YMR324CYMR324C 243 nt3.08□□□□□ -1.92
VPS30Q02948 YOR072W-AYOR072W-A 249 nt3.08□□□□□ -1.92
VPS30Q02948 TRM7YBR061C 933 nt3.08□□□□□ -1.92
VPS30Q02948 YPL150WYPL150W 2706 nt3.08□□□□□ -1.92
VPS30Q02948 DNA2YHR164C 4569 nt3.08□□□□□ -1.92
VPS30Q02948 BUB1YGR188C 3066 nt3.08□□□□□ -1.92
VPS30Q02948 SPB1YCL054W 2526 nt3.08□□□□□ -1.92
VPS30Q02948 TCB2YNL087W 3537 nt3.07□□□□□ -1.92
VPS30Q02948 SEC7YDR170C 6030 nt3.07□□□□□ -1.92
VPS30Q02948 SAK1YER129W 3429 nt3.07□□□□□ -1.92
VPS30Q02948 MET6YER091C 2304 nt3.07□□□□□ -1.92
VPS30Q02948 PRK1YIL095W 2433 nt3.07□□□□□ -1.92
VPS30Q02948 YJL020W-AYJL020W-A 258 nt3.07□□□□□ -1.92
VPS30Q02948 HCH1YNL281W 462 nt3.07□□□□□ -1.92
VPS30Q02948 YPL182CYPL182C 384 nt3.07□□□□□ -1.92
VPS30Q02948 MGR1YCL044C 1254 nt3.07□□□□□ -1.92
VPS30Q02948 PSO2YMR137C 1986 nt3.07□□□□□ -1.92
VPS30Q02948 YLL032CYLL032C 2478 nt3.07□□□□□ -1.92
VPS30Q02948 BPT1YLL015W 4680 nt3.06□□□□□ -1.92
VPS30Q02948 LCL2YLR104W 396 nt3.06□□□□□ -1.92
VPS30Q02948 ECM29YHL030W 5607 nt3.05□□□□□ -1.92
VPS30Q02948 RLF2YPR018W 1821 nt3.05□□□□□ -1.92
VPS30Q02948 YIL066W-AYIL066W-A 444 nt3.05□□□□□ -1.92
VPS30Q02948 YPR099CYPR099C 357 nt3.05□□□□□ -1.92
VPS30Q02948 YPR146CYPR146C 330 nt3.05□□□□□ -1.92
VPS30Q02948 snR51snR51 107 nt3.05□□□□□ -1.92
VPS30Q02948 YIL082W-AYIL082W-A 4497 nt3.05□□□□□ -1.92
VPS30Q02948 YJL070CYJL070C 2667 nt3.05□□□□□ -1.92
VPS30Q02948 SSN2YDR443C 4263 nt3.05□□□□□ -1.92
VPS30Q02948 YGL007C-AYGL007C-A 87 nt3.04□□□□□ -1.92
VPS30Q02948 ALG13YGL047W 609 nt3.04□□□□□ -1.92
VPS30Q02948 RPL32YBL092W 393 nt3.04□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms