Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 RARRES2P4-201ENST00000514074 484 ntBASIC18.1■□□□□ 0.49
CSNK1A1P48729 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 AL157384.1-201ENST00000445995 2473 ntBASIC18.1■□□□□ 0.49
CSNK1A1P48729 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1A1P48729 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CSNK1A1P48729 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 AL121603.2-201ENST00000557373 2117 ntBASIC18.09■□□□□ 0.49
CSNK1A1P48729 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 AC073111.5-205ENST00000641717 521 ntBASIC18.09■□□□□ 0.49
CSNK1A1P48729 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1A1P48729 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1A1P48729 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.08■□□□□ 0.49
CSNK1A1P48729 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.08■□□□□ 0.49
CSNK1A1P48729 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CSNK1A1P48729 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.08■□□□□ 0.48
CSNK1A1P48729 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.08■□□□□ 0.48
CSNK1A1P48729 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.08■□□□□ 0.48
CSNK1A1P48729 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 AC005181.1-201ENST00000604782 1256 ntBASIC18.08■□□□□ 0.48
CSNK1A1P48729 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 AC073314.1-201ENST00000568729 2216 ntBASIC18.08■□□□□ 0.48
CSNK1A1P48729 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1A1P48729 CYP21A1P-202ENST00000354927 1481 ntBASIC18.07■□□□□ 0.48
CSNK1A1P48729 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms