Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCL3L1P16619 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL3L1P16619 AC087633.2-202ENST00000565166 1439 ntBASIC16.81■□□□□ 0.28
CCL3L1P16619 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL3L1P16619 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL3L1P16619 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL3L1P16619 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCL3L1P16619 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL3L1P16619 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.81■□□□□ 0.28
CCL3L1P16619 CYP2T3P-201ENST00000601990 817 ntBASIC16.81■□□□□ 0.28
CCL3L1P16619 AC100791.3-201ENST00000617619 330 ntBASIC16.81■□□□□ 0.28
CCL3L1P16619 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL3L1P16619 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL3L1P16619 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCL3L1P16619 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL3L1P16619 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL3L1P16619 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCL3L1P16619 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.8■□□□□ 0.28
CCL3L1P16619 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL3L1P16619 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCL3L1P16619 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL3L1P16619 AL157384.1-201ENST00000445995 2473 ntBASIC16.8■□□□□ 0.28
CCL3L1P16619 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL3L1P16619 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL3L1P16619 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCL3L1P16619 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL3L1P16619 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 GUSBP6-202ENST00000438529 1198 ntBASIC16.79■□□□□ 0.28
CCL3L1P16619 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.79■□□□□ 0.28
CCL3L1P16619 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.79■□□□□ 0.28
CCL3L1P16619 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.79■□□□□ 0.28
CCL3L1P16619 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL3L1P16619 AL356652.1-201ENST00000615962 565 ntBASIC16.79■□□□□ 0.28
CCL3L1P16619 AL109923.1-201ENST00000618799 583 ntBASIC16.79■□□□□ 0.28
CCL3L1P16619 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL3L1P16619 KRT17P1-201ENST00000399211 1546 ntBASIC16.79■□□□□ 0.28
CCL3L1P16619 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL3L1P16619 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL3L1P16619 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL3L1P16619 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL3L1P16619 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL3L1P16619 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL3L1P16619 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL3L1P16619 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL3L1P16619 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL3L1P16619 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL3L1P16619 KRT18P68-201ENST00000392293 1000 ntBASIC16.78■□□□□ 0.28
CCL3L1P16619 SLC29A4P1-201ENST00000398760 971 ntBASIC16.78■□□□□ 0.28
CCL3L1P16619 BX276092.2-201ENST00000417668 665 ntBASIC16.78■□□□□ 0.28
CCL3L1P16619 PGM5P4-201ENST00000421970 445 ntBASIC16.78■□□□□ 0.28
CCL3L1P16619 TSPY6P-201ENST00000448518 926 ntBASIC16.78■□□□□ 0.28
CCL3L1P16619 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL3L1P16619 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL3L1P16619 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL3L1P16619 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms