Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SH2D1AO60880 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
SH2D1AO60880 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SH2D1AO60880 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SH2D1AO60880 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SH2D1AO60880 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SH2D1AO60880 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SH2D1AO60880 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.2■□□□□ 0.02
SH2D1AO60880 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH2D1AO60880 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SH2D1AO60880 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SH2D1AO60880 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SH2D1AO60880 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.19■□□□□ 0.02
SH2D1AO60880 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.19■□□□□ 0.02
SH2D1AO60880 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.19■□□□□ 0.02
SH2D1AO60880 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.19■□□□□ 0.02
SH2D1AO60880 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.19■□□□□ 0.02
SH2D1AO60880 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 EEF1DP3-203ENST00000566025 782 ntBASIC15.19■□□□□ 0.02
SH2D1AO60880 AC053503.5-201ENST00000601508 636 ntBASIC15.19■□□□□ 0.02
SH2D1AO60880 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SH2D1AO60880 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SH2D1AO60880 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
SH2D1AO60880 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH2D1AO60880 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.18■□□□□ 0.02
SH2D1AO60880 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SH2D1AO60880 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.18■□□□□ 0.02
SH2D1AO60880 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 AL356441.2-201ENST00000443009 864 ntBASIC15.18■□□□□ 0.02
SH2D1AO60880 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.18■□□□□ 0.02
SH2D1AO60880 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.18■□□□□ 0.02
SH2D1AO60880 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 BX323043.1-201ENST00000641006 1765 ntBASIC15.18■□□□□ 0.02
SH2D1AO60880 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.18■□□□□ 0.02
SH2D1AO60880 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.18■□□□□ 0.02
SH2D1AO60880 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.18■□□□□ 0.02
SH2D1AO60880 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH2D1AO60880 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 AL158211.5-201ENST00000623583 2518 ntBASIC15.17■□□□□ 0.02
SH2D1AO60880 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH2D1AO60880 AC131281.2-201ENST00000520478 145 ntBASIC15.17■□□□□ 0.02
SH2D1AO60880 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.17■□□□□ 0.02
SH2D1AO60880 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.17■□□□□ 0.02
SH2D1AO60880 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms