Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXD2O60548 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
FOXD2O60548 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXD2O60548 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
FOXD2O60548 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXD2O60548 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXD2O60548 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXD2O60548 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
FOXD2O60548 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
FOXD2O60548 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXD2O60548 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXD2O60548 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
FOXD2O60548 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXD2O60548 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
FOXD2O60548 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD2O60548 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD2O60548 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
FOXD2O60548 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.45■□□□□ 0.86
FOXD2O60548 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXD2O60548 AC091799.1-201ENST00000422823 811 ntBASIC20.45■□□□□ 0.86
FOXD2O60548 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
FOXD2O60548 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXD2O60548 RARRES2P10-201ENST00000564312 460 ntBASIC20.45■□□□□ 0.86
FOXD2O60548 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXD2O60548 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXD2O60548 AC110285.5-201ENST00000611501 352 ntBASIC20.45■□□□□ 0.86
FOXD2O60548 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXD2O60548 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXD2O60548 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXD2O60548 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXD2O60548 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD2O60548 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
FOXD2O60548 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
FOXD2O60548 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXD2O60548 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXD2O60548 AC239809.2-201ENST00000415381 517 ntBASIC20.44■□□□□ 0.86
FOXD2O60548 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 KRT18P35-201ENST00000510488 1269 ntBASIC20.44■□□□□ 0.86
FOXD2O60548 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXD2O60548 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
FOXD2O60548 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXD2O60548 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXD2O60548 MTDHP1-201ENST00000605323 784 ntBASIC20.44■□□□□ 0.86
FOXD2O60548 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
FOXD2O60548 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXD2O60548 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXD2O60548 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FOXD2O60548 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXD2O60548 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.43■□□□□ 0.86
FOXD2O60548 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXD2O60548 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FOXD2O60548 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FOXD2O60548 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
FOXD2O60548 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
FOXD2O60548 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXD2O60548 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXD2O60548 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXD2O60548 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXD2O60548 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
FOXD2O60548 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
FOXD2O60548 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXD2O60548 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXD2O60548 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms