Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PROM1O43490 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 CYP2T1P-201ENST00000432607 1285 ntBASIC19.32■□□□□ 0.68
PROM1O43490 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.32■□□□□ 0.68
PROM1O43490 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.32■□□□□ 0.68
PROM1O43490 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.32■□□□□ 0.68
PROM1O43490 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
PROM1O43490 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.32■□□□□ 0.68
PROM1O43490 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.32■□□□□ 0.68
PROM1O43490 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PROM1O43490 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PROM1O43490 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.31■□□□□ 0.68
PROM1O43490 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.31■□□□□ 0.68
PROM1O43490 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.31■□□□□ 0.68
PROM1O43490 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.31■□□□□ 0.68
PROM1O43490 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.31■□□□□ 0.68
PROM1O43490 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.31■□□□□ 0.68
PROM1O43490 AC026185.1-201ENST00000445748 174 ntBASIC19.31■□□□□ 0.68
PROM1O43490 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 AC069236.1-201ENST00000604339 616 ntBASIC19.31■□□□□ 0.68
PROM1O43490 AC005181.1-201ENST00000604782 1256 ntBASIC19.31■□□□□ 0.68
PROM1O43490 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 AL157384.1-201ENST00000445995 2473 ntBASIC19.31■□□□□ 0.68
PROM1O43490 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PROM1O43490 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PROM1O43490 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PROM1O43490 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
PROM1O43490 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PROM1O43490 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PROM1O43490 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.3■□□□□ 0.68
PROM1O43490 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.3■□□□□ 0.68
PROM1O43490 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.3■□□□□ 0.68
PROM1O43490 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PROM1O43490 AC100791.3-201ENST00000617619 330 ntBASIC19.3■□□□□ 0.68
PROM1O43490 AC008694.1-202ENST00000636953 945 ntBASIC19.3■□□□□ 0.68
PROM1O43490 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PROM1O43490 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PROM1O43490 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PROM1O43490 CYP21A1P-202ENST00000354927 1481 ntBASIC19.29■□□□□ 0.68
PROM1O43490 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PROM1O43490 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 OR10C1-204ENST00000622521 1039 ntBASIC19.29■□□□□ 0.68
PROM1O43490 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
PROM1O43490 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
PROM1O43490 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PROM1O43490 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
PROM1O43490 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
PROM1O43490 AP005212.1-201ENST00000581547 1997 ntBASIC19.28■□□□□ 0.68
PROM1O43490 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PROM1O43490 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.28■□□□□ 0.68
PROM1O43490 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PROM1O43490 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.28■□□□□ 0.68
PROM1O43490 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PROM1O43490 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PROM1O43490 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PROM1O43490 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms