Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDX4O14627 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDX4O14627 CYP2D8P-201ENST00000433633 1490 ntBASIC19.8■□□□□ 0.76
CDX4O14627 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.8■□□□□ 0.76
CDX4O14627 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDX4O14627 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDX4O14627 AL137013.1-201ENST00000432946 1228 ntBASIC19.8■□□□□ 0.76
CDX4O14627 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDX4O14627 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.8■□□□□ 0.76
CDX4O14627 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.8■□□□□ 0.76
CDX4O14627 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.8■□□□□ 0.76
CDX4O14627 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 NTF6B-201ENST00000591913 560 ntBASIC19.8■□□□□ 0.76
CDX4O14627 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.8■□□□□ 0.76
CDX4O14627 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDX4O14627 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDX4O14627 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
CDX4O14627 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
CDX4O14627 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 KRT18P22-201ENST00000402024 1347 ntBASIC19.79■□□□□ 0.76
CDX4O14627 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.79■□□□□ 0.76
CDX4O14627 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDX4O14627 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.79■□□□□ 0.76
CDX4O14627 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.79■□□□□ 0.76
CDX4O14627 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDX4O14627 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.78■□□□□ 0.76
CDX4O14627 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
CDX4O14627 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDX4O14627 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.78■□□□□ 0.76
CDX4O14627 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.78■□□□□ 0.76
CDX4O14627 AC104076.2-201ENST00000448912 469 ntBASIC19.78■□□□□ 0.76
CDX4O14627 DUX4L26-201ENST00000489078 1255 ntBASIC19.78■□□□□ 0.76
CDX4O14627 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.78■□□□□ 0.76
CDX4O14627 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.78■□□□□ 0.76
CDX4O14627 NAPSB-206ENST00000562112 1266 ntBASIC19.78■□□□□ 0.76
CDX4O14627 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDX4O14627 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.78■□□□□ 0.76
CDX4O14627 AC010947.1-201ENST00000623454 693 ntBASIC19.78■□□□□ 0.76
CDX4O14627 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDX4O14627 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDX4O14627 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDX4O14627 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.77■□□□□ 0.76
CDX4O14627 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.77■□□□□ 0.76
CDX4O14627 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.77■□□□□ 0.76
CDX4O14627 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDX4O14627 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.77■□□□□ 0.76
CDX4O14627 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.77■□□□□ 0.76
CDX4O14627 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.77■□□□□ 0.76
CDX4O14627 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.77■□□□□ 0.76
CDX4O14627 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDX4O14627 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CDX4O14627 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.77■□□□□ 0.75
CDX4O14627 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CDX4O14627 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 AC124283.5-201ENST00000624661 1809 ntBASIC19.76■□□□□ 0.75
CDX4O14627 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDX4O14627 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.76■□□□□ 0.75
CDX4O14627 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDX4O14627 AL390955.1-201ENST00000428694 934 ntBASIC19.76■□□□□ 0.75
CDX4O14627 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDX4O14627 FITM1-202ENST00000559294 800 ntBASIC19.76■□□□□ 0.75
CDX4O14627 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CDX4O14627 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.76■□□□□ 0.75
CDX4O14627 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.76■□□□□ 0.75
CDX4O14627 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
CDX4O14627 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDX4O14627 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDX4O14627 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDX4O14627 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms