Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-2A0A0G2JF93 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms