Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 AC073648.6-201ENST00000641589 218 ntBASIC22.44■■□□□ 1.18
PCDHGC5Q9Y5F6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 POU5F1P4-201ENST00000413175 1085 ntBASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 RPS2P4-201ENST00000476944 856 ntBASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC5Q9Y5F6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 FEM1AP1-201ENST00000431297 1995 ntBASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 AL355472.2-201ENST00000422958 438 ntBASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC5Q9Y5F6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 LINC01006-201ENST00000333319 2292 ntBASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 UNC93B4-201ENST00000505679 747 ntBASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 UNC93B5-201ENST00000530315 699 ntBASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGC5Q9Y5F6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 AC026366.1-201ENST00000488803 879 ntBASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 KRT17P1-201ENST00000399211 1546 ntBASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 AL121603.2-201ENST00000557373 2117 ntBASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 KRT16P2-201ENST00000414673 1423 ntBASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC5Q9Y5F6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
PCDHGC5Q9Y5F6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGC5Q9Y5F6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC5Q9Y5F6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms