Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DUX4Q9UBX2 AC055733.4-201ENST00000638462 1354 ntBASIC17.83■□□□□ 0.45
DUX4Q9UBX2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 AC097381.1-201ENST00000429019 1296 ntBASIC17.83■□□□□ 0.44
DUX4Q9UBX2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 AL034346.1-201ENST00000568244 1277 ntBASIC17.83■□□□□ 0.44
DUX4Q9UBX2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 MIR6821-201ENST00000617625 74 ntBASIC17.83■□□□□ 0.44
DUX4Q9UBX2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 LINC01006-201ENST00000333319 2292 ntBASIC17.83■□□□□ 0.44
DUX4Q9UBX2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DUX4Q9UBX2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 AC009237.3-201ENST00000393279 1427 ntBASIC17.82■□□□□ 0.44
DUX4Q9UBX2 AL020996.1-203ENST00000536896 2307 ntBASIC17.82■□□□□ 0.44
DUX4Q9UBX2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 LINC02228-203ENST00000641970 1355 ntBASIC17.82■□□□□ 0.44
DUX4Q9UBX2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 AC123595.1-201ENST00000440769 1046 ntBASIC17.82■□□□□ 0.44
DUX4Q9UBX2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DUX4Q9UBX2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L2-201ENST00000561772 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 TERF1P2-201ENST00000583350 1212 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L6-201ENST00000626483 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L1-201ENST00000627662 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L8-201ENST00000629013 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L3-201ENST00000630187 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L7-201ENST00000630678 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DUX4L5-201ENST00000630834 1275 ntBASIC17.81■□□□□ 0.44
DUX4Q9UBX2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.81■□□□□ 0.44
DUX4Q9UBX2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 KRT18P14-201ENST00000534205 1250 ntBASIC17.8■□□□□ 0.44
DUX4Q9UBX2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DUX4Q9UBX2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms