Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PIF1Q9H611 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PIF1Q9H611 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PIF1Q9H611 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.44■□□□□ 0.7
PIF1Q9H611 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PIF1Q9H611 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PIF1Q9H611 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 MIR638-201ENST00000385237 100 ntBASIC19.44■□□□□ 0.7
PIF1Q9H611 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.44■□□□□ 0.7
PIF1Q9H611 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.44■□□□□ 0.7
PIF1Q9H611 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PIF1Q9H611 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
PIF1Q9H611 AL136967.2-201ENST00000623968 743 ntBASIC19.44■□□□□ 0.7
PIF1Q9H611 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
PIF1Q9H611 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PIF1Q9H611 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
PIF1Q9H611 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIF1Q9H611 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.44■□□□□ 0.7
PIF1Q9H611 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
PIF1Q9H611 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PIF1Q9H611 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 AC099791.1-201ENST00000416440 715 ntBASIC19.43■□□□□ 0.7
PIF1Q9H611 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.43■□□□□ 0.7
PIF1Q9H611 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.43■□□□□ 0.7
PIF1Q9H611 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PIF1Q9H611 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIF1Q9H611 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.42■□□□□ 0.7
PIF1Q9H611 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.42■□□□□ 0.7
PIF1Q9H611 AF213884.3-201ENST00000563833 479 ntBASIC19.42■□□□□ 0.7
PIF1Q9H611 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.42■□□□□ 0.7
PIF1Q9H611 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PIF1Q9H611 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PIF1Q9H611 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PIF1Q9H611 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.41■□□□□ 0.7
PIF1Q9H611 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.41■□□□□ 0.7
PIF1Q9H611 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.41■□□□□ 0.7
PIF1Q9H611 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.41■□□□□ 0.7
PIF1Q9H611 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIF1Q9H611 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PIF1Q9H611 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIF1Q9H611 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIF1Q9H611 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIF1Q9H611 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.4■□□□□ 0.7
PIF1Q9H611 AC142381.2-201ENST00000566120 298 ntBASIC19.4■□□□□ 0.7
PIF1Q9H611 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIF1Q9H611 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.4■□□□□ 0.7
PIF1Q9H611 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
PIF1Q9H611 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 AP004607.4-201ENST00000530158 1459 ntBASIC19.4■□□□□ 0.7
PIF1Q9H611 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PIF1Q9H611 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.4■□□□□ 0.7
PIF1Q9H611 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.39■□□□□ 0.7
PIF1Q9H611 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PIF1Q9H611 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.39■□□□□ 0.7
PIF1Q9H611 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.7
PIF1Q9H611 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIF1Q9H611 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIF1Q9H611 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.39■□□□□ 0.69
PIF1Q9H611 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.39■□□□□ 0.69
PIF1Q9H611 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms