Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim11Q99PQ2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim11Q99PQ2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim11Q99PQ2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.21■□□□□ 0.83
Trim11Q99PQ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim11Q99PQ2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim11Q99PQ2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim11Q99PQ2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Gm5408-201ENSMUST00000197998 747 ntBASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms