Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTP4Q96DX8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTP4Q96DX8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTP4Q96DX8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTP4Q96DX8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTP4Q96DX8 AL391422.3-201ENST00000603791 2761 ntBASIC20.84■□□□□ 0.93
RTP4Q96DX8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTP4Q96DX8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTP4Q96DX8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTP4Q96DX8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTP4Q96DX8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.83■□□□□ 0.93
RTP4Q96DX8 CDV3P1-201ENST00000471403 739 ntBASIC20.83■□□□□ 0.93
RTP4Q96DX8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTP4Q96DX8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.83■□□□□ 0.93
RTP4Q96DX8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.92
RTP4Q96DX8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.92
RTP4Q96DX8 PKD1P6-201ENST00000343738 4769 ntBASIC20.82■□□□□ 0.92
RTP4Q96DX8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTP4Q96DX8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTP4Q96DX8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 FAM21FP-204ENST00000608637 956 ntBASIC20.82■□□□□ 0.92
RTP4Q96DX8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTP4Q96DX8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTP4Q96DX8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTP4Q96DX8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.82■□□□□ 0.92
RTP4Q96DX8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 TCF3P1-201ENST00000423021 1937 ntBASIC20.81■□□□□ 0.92
RTP4Q96DX8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 ID1-201ENST00000376105 1233 ntBASIC20.81■□□□□ 0.92
RTP4Q96DX8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTP4Q96DX8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.81■□□□□ 0.92
RTP4Q96DX8 AC112907.3-201ENST00000577781 2400 ntBASIC20.8■□□□□ 0.92
RTP4Q96DX8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTP4Q96DX8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms