Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 RN7SL471P-201ENST00000580476 299 ntBASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRPF38AQ8NAV1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 POM121L13P-201ENST00000422362 380 ntBASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 UBE2SP1-201ENST00000450587 669 ntBASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.59■■□□□ 1.37
PRPF38AQ8NAV1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 RPPH1-201ENST00000516869 333 ntBASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PRPF38AQ8NAV1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PRPF38AQ8NAV1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 C1QBPP2-201ENST00000528754 825 ntBASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 AC233263.1-201ENST00000578059 224 ntBASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 AC069544.1-201ENST00000609399 999 ntBASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PRPF38AQ8NAV1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 RPS2P4-201ENST00000476944 856 ntBASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 AC005829.2-201ENST00000571422 1056 ntBASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRPF38AQ8NAV1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.55■■□□□ 1.36
PRPF38AQ8NAV1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms