Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 HLA-L-209ENST00000420110 1011 ntBASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 AL121832.2-201ENST00000610979 668 ntBASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 AC026310.3-201ENST00000625186 2373 ntBASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 AC069236.1-201ENST00000604339 616 ntBASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 AL109923.1-201ENST00000618799 583 ntBASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP1BQ7LBR1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 NCF1B-203ENST00000435988 1254 ntBASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 RBM17P2-201ENST00000616397 1405 ntBASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP1BQ7LBR1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 SLC29A4P1-201ENST00000398760 971 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 CNN2P6-201ENST00000439038 900 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 AC007322.4-201ENST00000509611 723 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 AC083906.2-201ENST00000511578 360 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 AF201337.1-201ENST00000520239 748 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 AC243732.1-201ENST00000612648 864 ntBASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP1BQ7LBR1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP1BQ7LBR1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms