Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 MCRIP2P1-201ENST00000394346 511 ntBASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 AC069236.1-201ENST00000604339 616 ntBASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 AL356652.1-201ENST00000615962 565 ntBASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 OR10C1-204ENST00000622521 1039 ntBASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 AC073111.5-205ENST00000641717 521 ntBASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COLCA1Q6ZS62 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 CDCA4P2-201ENST00000441182 718 ntBASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 RAP2CP1-201ENST00000605103 478 ntBASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COLCA1Q6ZS62 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COLCA1Q6ZS62 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 AL512625.2-201ENST00000417533 625 ntBASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COLCA1Q6ZS62 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms