Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.28■□□□□ 0.84
CBX6O95503 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.28■□□□□ 0.84
CBX6O95503 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.28■□□□□ 0.84
CBX6O95503 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 AC012414.1-201ENST00000556676 535 ntBASIC20.28■□□□□ 0.84
CBX6O95503 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.28■□□□□ 0.84
CBX6O95503 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CBX6O95503 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.28■□□□□ 0.84
CBX6O95503 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CBX6O95503 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CBX6O95503 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
CBX6O95503 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CBX6O95503 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.27■□□□□ 0.84
CBX6O95503 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.27■□□□□ 0.84
CBX6O95503 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CBX6O95503 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CBX6O95503 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CBX6O95503 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CBX6O95503 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CBX6O95503 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CBX6O95503 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.26■□□□□ 0.83
CBX6O95503 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX6O95503 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.25■□□□□ 0.83
CBX6O95503 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CBX6O95503 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CBX6O95503 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX6O95503 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CBX6O95503 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.24■□□□□ 0.83
CBX6O95503 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.24■□□□□ 0.83
CBX6O95503 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 KRT18P14-201ENST00000534205 1250 ntBASIC20.24■□□□□ 0.83
CBX6O95503 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CBX6O95503 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX6O95503 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX6O95503 BX323043.1-201ENST00000641006 1765 ntBASIC20.23■□□□□ 0.83
CBX6O95503 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CBX6O95503 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.23■□□□□ 0.83
CBX6O95503 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CBX6O95503 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.23■□□□□ 0.83
CBX6O95503 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms