Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFA3O95167 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFA3O95167 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFA3O95167 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
NDUFA3O95167 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.32■□□□□ 0.2
NDUFA3O95167 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.32■□□□□ 0.2
NDUFA3O95167 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFA3O95167 AC100791.3-201ENST00000617619 330 ntBASIC16.32■□□□□ 0.2
NDUFA3O95167 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFA3O95167 AC073111.5-205ENST00000641717 521 ntBASIC16.32■□□□□ 0.2
NDUFA3O95167 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA3O95167 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA3O95167 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA3O95167 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA3O95167 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 AC069236.1-201ENST00000604339 616 ntBASIC16.31■□□□□ 0.2
NDUFA3O95167 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA3O95167 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA3O95167 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA3O95167 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA3O95167 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA3O95167 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NDUFA3O95167 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 CYP21A1P-202ENST00000354927 1481 ntBASIC16.3■□□□□ 0.2
NDUFA3O95167 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 FEM1AP1-201ENST00000431297 1995 ntBASIC16.3■□□□□ 0.2
NDUFA3O95167 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 PGM5P4-201ENST00000421970 445 ntBASIC16.3■□□□□ 0.2
NDUFA3O95167 CDCA4P2-201ENST00000441182 718 ntBASIC16.3■□□□□ 0.2
NDUFA3O95167 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA3O95167 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA3O95167 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA3O95167 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFA3O95167 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA3O95167 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA3O95167 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA3O95167 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 AC087633.2-202ENST00000565166 1439 ntBASIC16.29■□□□□ 0.2
NDUFA3O95167 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NDUFA3O95167 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 AC005181.1-201ENST00000604782 1256 ntBASIC16.29■□□□□ 0.2
NDUFA3O95167 RAP2CP1-201ENST00000605103 478 ntBASIC16.29■□□□□ 0.2
NDUFA3O95167 OR10C1-204ENST00000622521 1039 ntBASIC16.29■□□□□ 0.2
NDUFA3O95167 AC008694.1-202ENST00000636953 945 ntBASIC16.29■□□□□ 0.2
NDUFA3O95167 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
NDUFA3O95167 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NDUFA3O95167 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA3O95167 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFA3O95167 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFA3O95167 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NDUFA3O95167 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 KRT8P36-201ENST00000489121 1440 ntBASIC16.28■□□□□ 0.2
NDUFA3O95167 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 AP005212.1-201ENST00000581547 1997 ntBASIC16.28■□□□□ 0.2
NDUFA3O95167 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NDUFA3O95167 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NDUFA3O95167 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDUFA3O95167 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.28■□□□□ 0.2
NDUFA3O95167 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms