Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.21■■□□□ 1.31
CCNT1O60563 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
CCNT1O60563 AC087633.2-202ENST00000565166 1439 ntBASIC23.21■■□□□ 1.31
CCNT1O60563 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.21■■□□□ 1.31
CCNT1O60563 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
CCNT1O60563 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNT1O60563 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCNT1O60563 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNT1O60563 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNT1O60563 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNT1O60563 CYP2T3P-201ENST00000601990 817 ntBASIC23.2■■□□□ 1.3
CCNT1O60563 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNT1O60563 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNT1O60563 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNT1O60563 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNT1O60563 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNT1O60563 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNT1O60563 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCNT1O60563 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.19■■□□□ 1.3
CCNT1O60563 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCNT1O60563 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNT1O60563 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNT1O60563 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CCNT1O60563 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNT1O60563 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 PGM5P4-201ENST00000421970 445 ntBASIC23.18■■□□□ 1.3
CCNT1O60563 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CCNT1O60563 GUSBP6-202ENST00000438529 1198 ntBASIC23.18■■□□□ 1.3
CCNT1O60563 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.18■■□□□ 1.3
CCNT1O60563 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
CCNT1O60563 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.18■■□□□ 1.3
CCNT1O60563 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCNT1O60563 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNT1O60563 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNT1O60563 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCNT1O60563 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.17■■□□□ 1.3
CCNT1O60563 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCNT1O60563 KRT18P68-201ENST00000392293 1000 ntBASIC23.17■■□□□ 1.3
CCNT1O60563 TSPY6P-201ENST00000448518 926 ntBASIC23.17■■□□□ 1.3
CCNT1O60563 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.17■■□□□ 1.3
CCNT1O60563 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNT1O60563 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.17■■□□□ 1.3
CCNT1O60563 AL356652.1-201ENST00000615962 565 ntBASIC23.17■■□□□ 1.3
CCNT1O60563 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CCNT1O60563 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNT1O60563 KRT8P36-201ENST00000489121 1440 ntBASIC23.16■■□□□ 1.3
CCNT1O60563 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.16■■□□□ 1.3
CCNT1O60563 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.16■■□□□ 1.3
CCNT1O60563 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNT1O60563 SLC29A4P1-201ENST00000398760 971 ntBASIC23.16■■□□□ 1.3
CCNT1O60563 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCNT1O60563 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.16■■□□□ 1.3
CCNT1O60563 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms