Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FOXN1O15353 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
FOXN1O15353 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
FOXN1O15353 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
FOXN1O15353 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.45■■□□□ 1.51
FOXN1O15353 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
FOXN1O15353 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.45■■□□□ 1.5
FOXN1O15353 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.45■■□□□ 1.5
FOXN1O15353 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.45■■□□□ 1.5
FOXN1O15353 AC133681.1-201ENST00000465482 601 ntBASIC24.45■■□□□ 1.5
FOXN1O15353 AC145285.6-201ENST00000604632 637 ntBASIC24.45■■□□□ 1.5
FOXN1O15353 AL023875.1-201ENST00000640777 796 ntBASIC24.45■■□□□ 1.5
FOXN1O15353 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.45■■□□□ 1.5
FOXN1O15353 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.45■■□□□ 1.5
FOXN1O15353 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
FOXN1O15353 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXN1O15353 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.44■■□□□ 1.5
FOXN1O15353 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
FOXN1O15353 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.44■■□□□ 1.5
FOXN1O15353 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.44■■□□□ 1.5
FOXN1O15353 AC087388.1-201ENST00000571370 1112 ntBASIC24.44■■□□□ 1.5
FOXN1O15353 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.44■■□□□ 1.5
FOXN1O15353 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
FOXN1O15353 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.44■■□□□ 1.5
FOXN1O15353 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.44■■□□□ 1.5
FOXN1O15353 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.44■■□□□ 1.5
FOXN1O15353 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.44■■□□□ 1.5
FOXN1O15353 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
FOXN1O15353 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.43■■□□□ 1.5
FOXN1O15353 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.43■■□□□ 1.5
FOXN1O15353 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
FOXN1O15353 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.43■■□□□ 1.5
FOXN1O15353 MTDHP1-201ENST00000605323 784 ntBASIC24.43■■□□□ 1.5
FOXN1O15353 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXN1O15353 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXN1O15353 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.43■■□□□ 1.5
FOXN1O15353 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.43■■□□□ 1.5
FOXN1O15353 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FOXN1O15353 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
FOXN1O15353 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.42■■□□□ 1.5
FOXN1O15353 KRT126P-201ENST00000549467 1181 ntBASIC24.42■■□□□ 1.5
FOXN1O15353 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
FOXN1O15353 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
FOXN1O15353 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.42■■□□□ 1.5
FOXN1O15353 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
FOXN1O15353 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.41■■□□□ 1.5
FOXN1O15353 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.41■■□□□ 1.5
FOXN1O15353 FAM99A-202ENST00000538190 1989 ntBASIC24.41■■□□□ 1.5
FOXN1O15353 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FOXN1O15353 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
FOXN1O15353 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.4■■□□□ 1.5
FOXN1O15353 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
FOXN1O15353 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
FOXN1O15353 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
FOXN1O15353 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
FOXN1O15353 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
FOXN1O15353 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.4■■□□□ 1.5
FOXN1O15353 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.4■■□□□ 1.5
FOXN1O15353 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
FOXN1O15353 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
FOXN1O15353 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.4■■□□□ 1.5
FOXN1O15353 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.4■■□□□ 1.5
FOXN1O15353 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXN1O15353 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.39■■□□□ 1.5
FOXN1O15353 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.39■■□□□ 1.5
FOXN1O15353 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXN1O15353 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
FOXN1O15353 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
FOXN1O15353 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXN1O15353 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
FOXN1O15353 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms