Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Flg-201ENSMUST00000050758 1488 ntBASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm11249-201ENSMUST00000117071 859 ntBASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.86□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms