Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RpgrQ9R0X5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RpgrQ9R0X5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RpgrQ9R0X5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RpgrQ9R0X5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Amer2-203ENSMUST00000225247 2662 ntBASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Gm24970-201ENSMUST00000175582 82 ntBASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RpgrQ9R0X5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RpgrQ9R0X5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RpgrQ9R0X5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.22■■□□□ 1.47
RpgrQ9R0X5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.21■■□□□ 1.47
RpgrQ9R0X5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RpgrQ9R0X5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
RpgrQ9R0X5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.19■■□□□ 1.46
RpgrQ9R0X5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RpgrQ9R0X5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RpgrQ9R0X5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RpgrQ9R0X5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RpgrQ9R0X5 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.17■■□□□ 1.46
RpgrQ9R0X5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.17■■□□□ 1.46
RpgrQ9R0X5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.17■■□□□ 1.46
RpgrQ9R0X5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RpgrQ9R0X5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RpgrQ9R0X5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RpgrQ9R0X5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.15■■□□□ 1.46
RpgrQ9R0X5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RpgrQ9R0X5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RpgrQ9R0X5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
RpgrQ9R0X5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RpgrQ9R0X5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RpgrQ9R0X5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.13■■□□□ 1.45
RpgrQ9R0X5 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.13■■□□□ 1.45
RpgrQ9R0X5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RpgrQ9R0X5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RpgrQ9R0X5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RpgrQ9R0X5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RpgrQ9R0X5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RpgrQ9R0X5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RpgrQ9R0X5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RpgrQ9R0X5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RpgrQ9R0X5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RpgrQ9R0X5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RpgrQ9R0X5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RpgrQ9R0X5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RpgrQ9R0X5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RpgrQ9R0X5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RpgrQ9R0X5 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.09■■□□□ 1.45
RpgrQ9R0X5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.09■■□□□ 1.45
RpgrQ9R0X5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RpgrQ9R0X5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RpgrQ9R0X5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RpgrQ9R0X5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RpgrQ9R0X5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
RpgrQ9R0X5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RpgrQ9R0X5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RpgrQ9R0X5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.07■■□□□ 1.44
RpgrQ9R0X5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RpgrQ9R0X5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RpgrQ9R0X5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RpgrQ9R0X5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.05■■□□□ 1.44
RpgrQ9R0X5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RpgrQ9R0X5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RpgrQ9R0X5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RpgrQ9R0X5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.04■■□□□ 1.44
RpgrQ9R0X5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RpgrQ9R0X5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RpgrQ9R0X5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RpgrQ9R0X5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RpgrQ9R0X5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RpgrQ9R0X5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RpgrQ9R0X5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
RpgrQ9R0X5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
RpgrQ9R0X5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
RpgrQ9R0X5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RpgrQ9R0X5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RpgrQ9R0X5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RpgrQ9R0X5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RpgrQ9R0X5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RpgrQ9R0X5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24■■□□□ 1.43
RpgrQ9R0X5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RpgrQ9R0X5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RpgrQ9R0X5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.99■■□□□ 1.43
RpgrQ9R0X5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RpgrQ9R0X5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RpgrQ9R0X5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.97■■□□□ 1.43
RpgrQ9R0X5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RpgrQ9R0X5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RpgrQ9R0X5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RpgrQ9R0X5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RpgrQ9R0X5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.95■■□□□ 1.42
RpgrQ9R0X5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms