Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25,49■■□□□ 1,67
Rfc5Q9D0F6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25,49■■□□□ 1,67
Rfc5Q9D0F6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25,47■■□□□ 1,67
Rfc5Q9D0F6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Rfc5Q9D0F6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25,46■■□□□ 1,67
Rfc5Q9D0F6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25,46■■□□□ 1,67
Rfc5Q9D0F6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Rfc5Q9D0F6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25,45■■□□□ 1,66
Rfc5Q9D0F6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Rfc5Q9D0F6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25,44■■□□□ 1,66
Rfc5Q9D0F6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25,44■■□□□ 1,66
Rfc5Q9D0F6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25,44■■□□□ 1,66
Rfc5Q9D0F6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Rfc5Q9D0F6 Gm6821-201ENSMUST00000107540 542 ntBASIC25,42■■□□□ 1,66
Rfc5Q9D0F6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Rfc5Q9D0F6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Rfc5Q9D0F6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Rfc5Q9D0F6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Rfc5Q9D0F6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25,41■■□□□ 1,66
Rfc5Q9D0F6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Rfc5Q9D0F6 Gm42809-201ENSMUST00000198429 1138 ntBASIC25,4■■□□□ 1,66
Rfc5Q9D0F6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Rfc5Q9D0F6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25,39■■□□□ 1,66
Rfc5Q9D0F6 Gm8503-201ENSMUST00000118131 455 ntBASIC25,39■■□□□ 1,66
Rfc5Q9D0F6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25,39■■□□□ 1,66
Rfc5Q9D0F6 Nkain2-201ENSMUST00000092602 558 ntBASIC25,39■■□□□ 1,66
Rfc5Q9D0F6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25,39■■□□□ 1,65
Rfc5Q9D0F6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25,38■■□□□ 1,65
Rfc5Q9D0F6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25,38■■□□□ 1,65
Rfc5Q9D0F6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25,36■■□□□ 1,65
Rfc5Q9D0F6 Gm43445-201ENSMUST00000198564 2091 ntBASIC25,36■■□□□ 1,65
Rfc5Q9D0F6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25,36■■□□□ 1,65
Rfc5Q9D0F6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Rfc5Q9D0F6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Rfc5Q9D0F6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Rfc5Q9D0F6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25,34■■□□□ 1,65
Rfc5Q9D0F6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,34■■□□□ 1,65
Rfc5Q9D0F6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Rfc5Q9D0F6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Rfc5Q9D0F6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25,32■■□□□ 1,64
Rfc5Q9D0F6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25,31■■□□□ 1,64
Rfc5Q9D0F6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Rfc5Q9D0F6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25,31■■□□□ 1,64
Rfc5Q9D0F6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25,31■■□□□ 1,64
Rfc5Q9D0F6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25,31■■□□□ 1,64
Rfc5Q9D0F6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25,3■■□□□ 1,64
Rfc5Q9D0F6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25,3■■□□□ 1,64
Rfc5Q9D0F6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25,3■■□□□ 1,64
Rfc5Q9D0F6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25,3■■□□□ 1,64
Rfc5Q9D0F6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25,3■■□□□ 1,64
Rfc5Q9D0F6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Rfc5Q9D0F6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Rfc5Q9D0F6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Rfc5Q9D0F6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Rfc5Q9D0F6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Rfc5Q9D0F6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25,27■■□□□ 1,64
Rfc5Q9D0F6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Rfc5Q9D0F6 Gm9905-201ENSMUST00000065740 1845 ntBASIC25,26■■□□□ 1,63
Rfc5Q9D0F6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Rfc5Q9D0F6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Rfc5Q9D0F6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25,24■■□□□ 1,63
Rfc5Q9D0F6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rfc5Q9D0F6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25,22■■□□□ 1,63
Rfc5Q9D0F6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,22■■□□□ 1,63
Rfc5Q9D0F6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25,21■■□□□ 1,63
Rfc5Q9D0F6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Rfc5Q9D0F6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25,21■■□□□ 1,63
Rfc5Q9D0F6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Rfc5Q9D0F6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25,19■■□□□ 1,62
Rfc5Q9D0F6 Gm6206-201ENSMUST00000133472 2199 ntBASIC25,18■■□□□ 1,62
Rfc5Q9D0F6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25,18■■□□□ 1,62
Rfc5Q9D0F6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Pcf11-205ENSMUST00000208255 1720 ntBASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rfc5Q9D0F6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Rfc5Q9D0F6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25,16■■□□□ 1,62
Rfc5Q9D0F6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25,16■■□□□ 1,62
Rfc5Q9D0F6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Rfc5Q9D0F6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,16■■□□□ 1,62
Rfc5Q9D0F6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25,15■■□□□ 1,62
Rfc5Q9D0F6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Rfc5Q9D0F6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25,15■■□□□ 1,62
Rfc5Q9D0F6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Rfc5Q9D0F6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25,14■■□□□ 1,62
Rfc5Q9D0F6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Rfc5Q9D0F6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Rfc5Q9D0F6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25,12■■□□□ 1,61
Rfc5Q9D0F6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Rfc5Q9D0F6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25,1■■□□□ 1,61
Rfc5Q9D0F6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25,09■■□□□ 1,61
Rfc5Q9D0F6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25,09■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 27,3 ms