Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.71■■□□□ 1.71
Col25a1Q99MQ5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.69■■□□□ 1.7
Col25a1Q99MQ5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col25a1Q99MQ5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Col25a1Q99MQ5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Col25a1Q99MQ5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.68■■□□□ 1.7
Col25a1Q99MQ5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col25a1Q99MQ5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Col25a1Q99MQ5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col25a1Q99MQ5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Col25a1Q99MQ5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
Col25a1Q99MQ5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col25a1Q99MQ5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Col25a1Q99MQ5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col25a1Q99MQ5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.63■■□□□ 1.69
Col25a1Q99MQ5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.63■■□□□ 1.69
Col25a1Q99MQ5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
Col25a1Q99MQ5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col25a1Q99MQ5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Col25a1Q99MQ5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col25a1Q99MQ5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Col25a1Q99MQ5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.6■■□□□ 1.69
Col25a1Q99MQ5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Col25a1Q99MQ5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col25a1Q99MQ5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.59■■□□□ 1.69
Col25a1Q99MQ5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Col25a1Q99MQ5 Gm5812-201ENSMUST00000061073 957 ntBASIC25.58■■□□□ 1.69
Col25a1Q99MQ5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col25a1Q99MQ5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Col25a1Q99MQ5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.55■■□□□ 1.68
Col25a1Q99MQ5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col25a1Q99MQ5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col25a1Q99MQ5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col25a1Q99MQ5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col25a1Q99MQ5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col25a1Q99MQ5 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.51■■□□□ 1.67
Col25a1Q99MQ5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col25a1Q99MQ5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col25a1Q99MQ5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.5■■□□□ 1.67
Col25a1Q99MQ5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col25a1Q99MQ5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col25a1Q99MQ5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col25a1Q99MQ5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Col25a1Q99MQ5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.48■■□□□ 1.67
Col25a1Q99MQ5 Gm7332-201ENSMUST00000118351 454 ntBASIC25.48■■□□□ 1.67
Col25a1Q99MQ5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col25a1Q99MQ5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Col25a1Q99MQ5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col25a1Q99MQ5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col25a1Q99MQ5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.45■■□□□ 1.66
Col25a1Q99MQ5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.44■■□□□ 1.66
Col25a1Q99MQ5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col25a1Q99MQ5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col25a1Q99MQ5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
Col25a1Q99MQ5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col25a1Q99MQ5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col25a1Q99MQ5 Scarna2-201ENSMUST00000157560 414 ntBASIC25.42■■□□□ 1.66
Col25a1Q99MQ5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.42■■□□□ 1.66
Col25a1Q99MQ5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.41■■□□□ 1.66
Col25a1Q99MQ5 Gm4799-201ENSMUST00000095396 657 ntBASIC25.41■■□□□ 1.66
Col25a1Q99MQ5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col25a1Q99MQ5 Gm11687-201ENSMUST00000118911 886 ntBASIC25.4■■□□□ 1.66
Col25a1Q99MQ5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.4■■□□□ 1.66
Col25a1Q99MQ5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col25a1Q99MQ5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col25a1Q99MQ5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Col25a1Q99MQ5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col25a1Q99MQ5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col25a1Q99MQ5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.37■■□□□ 1.65
Col25a1Q99MQ5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Col25a1Q99MQ5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col25a1Q99MQ5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Col25a1Q99MQ5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.36■■□□□ 1.65
Col25a1Q99MQ5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col25a1Q99MQ5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Col25a1Q99MQ5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col25a1Q99MQ5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.34■■□□□ 1.65
Col25a1Q99MQ5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col25a1Q99MQ5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col25a1Q99MQ5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 Serp2-204ENSMUST00000228055 705 ntBASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
Col25a1Q99MQ5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col25a1Q99MQ5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
Col25a1Q99MQ5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col25a1Q99MQ5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col25a1Q99MQ5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col25a1Q99MQ5 Gm9806-201ENSMUST00000051080 552 ntBASIC25.3■■□□□ 1.64
Col25a1Q99MQ5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col25a1Q99MQ5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Col25a1Q99MQ5 Gm15546-201ENSMUST00000122095 826 ntBASIC25.27■■□□□ 1.64
Col25a1Q99MQ5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.27■■□□□ 1.64
Col25a1Q99MQ5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Col25a1Q99MQ5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Col25a1Q99MQ5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col25a1Q99MQ5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.26■■□□□ 1.63
Col25a1Q99MQ5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms