Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Pcdha11Q91Y19 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha11Q91Y19 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
Pcdha11Q91Y19 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Pcdha11Q91Y19 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.73■■□□□ 1.71
Pcdha11Q91Y19 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdha11Q91Y19 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Pcdha11Q91Y19 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdha11Q91Y19 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
Pcdha11Q91Y19 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdha11Q91Y19 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.68■■□□□ 1.7
Pcdha11Q91Y19 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdha11Q91Y19 Gm6821-201ENSMUST00000107540 542 ntBASIC25.68■■□□□ 1.7
Pcdha11Q91Y19 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdha11Q91Y19 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdha11Q91Y19 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha11Q91Y19 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha11Q91Y19 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha11Q91Y19 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha11Q91Y19 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Pcdha11Q91Y19 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha11Q91Y19 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha11Q91Y19 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha11Q91Y19 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdha11Q91Y19 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.64■■□□□ 1.7
Pcdha11Q91Y19 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha11Q91Y19 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.63■■□□□ 1.69
Pcdha11Q91Y19 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha11Q91Y19 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha11Q91Y19 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.62■■□□□ 1.69
Pcdha11Q91Y19 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdha11Q91Y19 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.61■■□□□ 1.69
Pcdha11Q91Y19 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha11Q91Y19 Gm8503-201ENSMUST00000118131 455 ntBASIC25.6■■□□□ 1.69
Pcdha11Q91Y19 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Pcdha11Q91Y19 Nkain2-201ENSMUST00000092602 558 ntBASIC25.6■■□□□ 1.69
Pcdha11Q91Y19 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdha11Q91Y19 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdha11Q91Y19 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdha11Q91Y19 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Pcdha11Q91Y19 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdha11Q91Y19 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Pcdha11Q91Y19 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdha11Q91Y19 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha11Q91Y19 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha11Q91Y19 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha11Q91Y19 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha11Q91Y19 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha11Q91Y19 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha11Q91Y19 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.54■■□□□ 1.68
Pcdha11Q91Y19 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdha11Q91Y19 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdha11Q91Y19 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdha11Q91Y19 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Pcdha11Q91Y19 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdha11Q91Y19 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Pcdha11Q91Y19 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.51■■□□□ 1.67
Pcdha11Q91Y19 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdha11Q91Y19 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdha11Q91Y19 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.49■■□□□ 1.67
Pcdha11Q91Y19 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha11Q91Y19 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdha11Q91Y19 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Pcdha11Q91Y19 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdha11Q91Y19 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdha11Q91Y19 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Pcdha11Q91Y19 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.45■■□□□ 1.66
Pcdha11Q91Y19 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdha11Q91Y19 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdha11Q91Y19 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.44■■□□□ 1.66
Pcdha11Q91Y19 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdha11Q91Y19 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
Pcdha11Q91Y19 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdha11Q91Y19 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.42■■□□□ 1.66
Pcdha11Q91Y19 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.42■■□□□ 1.66
Pcdha11Q91Y19 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdha11Q91Y19 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdha11Q91Y19 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdha11Q91Y19 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdha11Q91Y19 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Pcdha11Q91Y19 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
Pcdha11Q91Y19 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdha11Q91Y19 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.38■■□□□ 1.65
Pcdha11Q91Y19 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdha11Q91Y19 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Pcdha11Q91Y19 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdha11Q91Y19 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdha11Q91Y19 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Pcdha11Q91Y19 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.36■■□□□ 1.65
Pcdha11Q91Y19 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms