Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Gm22567-201ENSMUST00000175542 342 ntBASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.55■■□□□ 1.04
Cspg4Q8VHY0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.54■■□□□ 1.04
Cspg4Q8VHY0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg4Q8VHY0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cspg4Q8VHY0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.51■■□□□ 1.03
Cspg4Q8VHY0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cspg4Q8VHY0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cspg4Q8VHY0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg4Q8VHY0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.5■■□□□ 1.03
Cspg4Q8VHY0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cspg4Q8VHY0 Gm6311-201ENSMUST00000073790 878 ntBASIC21.49■■□□□ 1.03
Cspg4Q8VHY0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
Cspg4Q8VHY0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.48■■□□□ 1.03
Cspg4Q8VHY0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg4Q8VHY0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cspg4Q8VHY0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg4Q8VHY0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg4Q8VHY0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg4Q8VHY0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.47■■□□□ 1.03
Cspg4Q8VHY0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cspg4Q8VHY0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.44■■□□□ 1.02
Cspg4Q8VHY0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cspg4Q8VHY0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg4Q8VHY0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg4Q8VHY0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.43■■□□□ 1.02
Cspg4Q8VHY0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg4Q8VHY0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg4Q8VHY0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg4Q8VHY0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cspg4Q8VHY0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.41■■□□□ 1.02
Cspg4Q8VHY0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.4■■□□□ 1.02
Cspg4Q8VHY0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg4Q8VHY0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg4Q8VHY0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.39■■□□□ 1.02
Cspg4Q8VHY0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cspg4Q8VHY0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cspg4Q8VHY0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cspg4Q8VHY0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cspg4Q8VHY0 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.37■■□□□ 1.01
Cspg4Q8VHY0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cspg4Q8VHY0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cspg4Q8VHY0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.35■■□□□ 1.01
Cspg4Q8VHY0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cspg4Q8VHY0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cspg4Q8VHY0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cspg4Q8VHY0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.32■■□□□ 1
Cspg4Q8VHY0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cspg4Q8VHY0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cspg4Q8VHY0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Cspg4Q8VHY0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cspg4Q8VHY0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.27■■□□□ 1
Cspg4Q8VHY0 Gm5812-201ENSMUST00000061073 957 ntBASIC21.27■■□□□ 1
Cspg4Q8VHY0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cspg4Q8VHY0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cspg4Q8VHY0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cspg4Q8VHY0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg4Q8VHY0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cspg4Q8VHY0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg4Q8VHY0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg4Q8VHY0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg4Q8VHY0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.22■□□□□ 0.99
Cspg4Q8VHY0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg4Q8VHY0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg4Q8VHY0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.21■□□□□ 0.99
Cspg4Q8VHY0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg4Q8VHY0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg4Q8VHY0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cspg4Q8VHY0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cspg4Q8VHY0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg4Q8VHY0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg4Q8VHY0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms