Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh18Q8VHR0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh18Q8VHR0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh18Q8VHR0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh18Q8VHR0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh18Q8VHR0 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.11■■□□□ 1.29
Pcdh18Q8VHR0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh18Q8VHR0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.1■■□□□ 1.29
Pcdh18Q8VHR0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh18Q8VHR0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh18Q8VHR0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Pcdh18Q8VHR0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdh18Q8VHR0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdh18Q8VHR0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdh18Q8VHR0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh18Q8VHR0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh18Q8VHR0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdh18Q8VHR0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdh18Q8VHR0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdh18Q8VHR0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Pcdh18Q8VHR0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh18Q8VHR0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdh18Q8VHR0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh18Q8VHR0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh18Q8VHR0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh18Q8VHR0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh18Q8VHR0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh18Q8VHR0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdh18Q8VHR0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh18Q8VHR0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh18Q8VHR0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Pcdh18Q8VHR0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh18Q8VHR0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh18Q8VHR0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh18Q8VHR0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh18Q8VHR0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh18Q8VHR0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh18Q8VHR0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh18Q8VHR0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdh18Q8VHR0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh18Q8VHR0 Gm16148-201ENSMUST00000119653 893 ntBASIC22.94■■□□□ 1.26
Pcdh18Q8VHR0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
Pcdh18Q8VHR0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh18Q8VHR0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh18Q8VHR0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Pcdh18Q8VHR0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh18Q8VHR0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh18Q8VHR0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh18Q8VHR0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh18Q8VHR0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh18Q8VHR0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh18Q8VHR0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh18Q8VHR0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh18Q8VHR0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Pcdh18Q8VHR0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh18Q8VHR0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdh18Q8VHR0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdh18Q8VHR0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdh18Q8VHR0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh18Q8VHR0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdh18Q8VHR0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.85■■□□□ 1.25
Pcdh18Q8VHR0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh18Q8VHR0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh18Q8VHR0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdh18Q8VHR0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Pcdh18Q8VHR0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh18Q8VHR0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh18Q8VHR0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh18Q8VHR0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh18Q8VHR0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh18Q8VHR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh18Q8VHR0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh18Q8VHR0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pcdh18Q8VHR0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh18Q8VHR0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh18Q8VHR0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcdh18Q8VHR0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh18Q8VHR0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms