Protein–RNA interactions for Protein: Q8R493

Chrnb4, Neuronal acetylcholine receptor subunit beta-4, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb4Q8R493 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrnb4Q8R493 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrnb4Q8R493 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Chrnb4Q8R493 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrnb4Q8R493 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrnb4Q8R493 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.46■■□□□ 1.03
Chrnb4Q8R493 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chrnb4Q8R493 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.46■■□□□ 1.03
Chrnb4Q8R493 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Chrnb4Q8R493 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chrnb4Q8R493 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Chrnb4Q8R493 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chrnb4Q8R493 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chrnb4Q8R493 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.44■■□□□ 1.02
Chrnb4Q8R493 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.44■■□□□ 1.02
Chrnb4Q8R493 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chrnb4Q8R493 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chrnb4Q8R493 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chrnb4Q8R493 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Chrnb4Q8R493 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chrnb4Q8R493 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.42■■□□□ 1.02
Chrnb4Q8R493 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chrnb4Q8R493 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chrnb4Q8R493 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chrnb4Q8R493 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chrnb4Q8R493 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrnb4Q8R493 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chrnb4Q8R493 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Chrnb4Q8R493 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chrnb4Q8R493 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.38■■□□□ 1.01
Chrnb4Q8R493 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrnb4Q8R493 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrnb4Q8R493 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrnb4Q8R493 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrnb4Q8R493 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrnb4Q8R493 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrnb4Q8R493 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Chrnb4Q8R493 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrnb4Q8R493 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrnb4Q8R493 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrnb4Q8R493 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrnb4Q8R493 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrnb4Q8R493 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chrnb4Q8R493 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chrnb4Q8R493 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chrnb4Q8R493 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrnb4Q8R493 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.31■■□□□ 1
Chrnb4Q8R493 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.31■■□□□ 1
Chrnb4Q8R493 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.31■■□□□ 1
Chrnb4Q8R493 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrnb4Q8R493 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.29■■□□□ 1
Chrnb4Q8R493 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrnb4Q8R493 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chrnb4Q8R493 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.28■■□□□ 1
Chrnb4Q8R493 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrnb4Q8R493 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrnb4Q8R493 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chrnb4Q8R493 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chrnb4Q8R493 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chrnb4Q8R493 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Chrnb4Q8R493 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Chrnb4Q8R493 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrnb4Q8R493 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrnb4Q8R493 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.24■□□□□ 0.99
Chrnb4Q8R493 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.24■□□□□ 0.99
Chrnb4Q8R493 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chrnb4Q8R493 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Chrnb4Q8R493 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrnb4Q8R493 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Chrnb4Q8R493 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Chrnb4Q8R493 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrnb4Q8R493 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrnb4Q8R493 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chrnb4Q8R493 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Chrnb4Q8R493 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.2■□□□□ 0.98
Chrnb4Q8R493 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrnb4Q8R493 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrnb4Q8R493 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chrnb4Q8R493 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.2■□□□□ 0.98
Chrnb4Q8R493 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrnb4Q8R493 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrnb4Q8R493 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrnb4Q8R493 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrnb4Q8R493 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrnb4Q8R493 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Chrnb4Q8R493 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrnb4Q8R493 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrnb4Q8R493 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrnb4Q8R493 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrnb4Q8R493 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrnb4Q8R493 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrnb4Q8R493 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrnb4Q8R493 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chrnb4Q8R493 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrnb4Q8R493 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms