Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubqln1Q8R317 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubqln1Q8R317 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubqln1Q8R317 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubqln1Q8R317 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ubqln1Q8R317 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.96■■□□□ 1.27
Ubqln1Q8R317 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubqln1Q8R317 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.96■■□□□ 1.27
Ubqln1Q8R317 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubqln1Q8R317 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubqln1Q8R317 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubqln1Q8R317 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubqln1Q8R317 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubqln1Q8R317 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubqln1Q8R317 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubqln1Q8R317 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubqln1Q8R317 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubqln1Q8R317 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ubqln1Q8R317 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubqln1Q8R317 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ubqln1Q8R317 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
Ubqln1Q8R317 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ubqln1Q8R317 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ubqln1Q8R317 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ubqln1Q8R317 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
Ubqln1Q8R317 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ubqln1Q8R317 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ubqln1Q8R317 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ubqln1Q8R317 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ubqln1Q8R317 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ubqln1Q8R317 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ubqln1Q8R317 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ubqln1Q8R317 Amer2-203ENSMUST00000225247 2662 ntBASIC22.87■■□□□ 1.25
Ubqln1Q8R317 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ubqln1Q8R317 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ubqln1Q8R317 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Ubqln1Q8R317 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.86■■□□□ 1.25
Ubqln1Q8R317 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ubqln1Q8R317 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.84■■□□□ 1.25
Ubqln1Q8R317 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.84■■□□□ 1.25
Ubqln1Q8R317 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ubqln1Q8R317 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ubqln1Q8R317 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ubqln1Q8R317 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ubqln1Q8R317 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.81■■□□□ 1.24
Ubqln1Q8R317 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.81■■□□□ 1.24
Ubqln1Q8R317 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ubqln1Q8R317 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ubqln1Q8R317 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ubqln1Q8R317 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ubqln1Q8R317 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Ubqln1Q8R317 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ubqln1Q8R317 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Ubqln1Q8R317 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ubqln1Q8R317 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Ubqln1Q8R317 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ubqln1Q8R317 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.77■■□□□ 1.24
Ubqln1Q8R317 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ubqln1Q8R317 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ubqln1Q8R317 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Ubqln1Q8R317 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ubqln1Q8R317 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ubqln1Q8R317 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ubqln1Q8R317 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ubqln1Q8R317 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ubqln1Q8R317 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ubqln1Q8R317 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ubqln1Q8R317 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ubqln1Q8R317 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Ubqln1Q8R317 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.74■■□□□ 1.23
Ubqln1Q8R317 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ubqln1Q8R317 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ubqln1Q8R317 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ubqln1Q8R317 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ubqln1Q8R317 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.72■■□□□ 1.23
Ubqln1Q8R317 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.72■■□□□ 1.23
Ubqln1Q8R317 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ubqln1Q8R317 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ubqln1Q8R317 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Ubqln1Q8R317 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ubqln1Q8R317 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Ubqln1Q8R317 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubqln1Q8R317 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubqln1Q8R317 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.67■■□□□ 1.22
Ubqln1Q8R317 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ubqln1Q8R317 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubqln1Q8R317 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Ubqln1Q8R317 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ubqln1Q8R317 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ubqln1Q8R317 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.63■■□□□ 1.21
Ubqln1Q8R317 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
Ubqln1Q8R317 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.63■■□□□ 1.21
Ubqln1Q8R317 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubqln1Q8R317 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ubqln1Q8R317 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubqln1Q8R317 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubqln1Q8R317 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubqln1Q8R317 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ubqln1Q8R317 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubqln1Q8R317 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms