Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tm6sf2Q8R1J1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tm6sf2Q8R1J1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.97■■□□□ 1.27
Tm6sf2Q8R1J1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Tm6sf2Q8R1J1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.95■■□□□ 1.26
Tm6sf2Q8R1J1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tm6sf2Q8R1J1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Tm6sf2Q8R1J1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tm6sf2Q8R1J1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Tm6sf2Q8R1J1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Tm6sf2Q8R1J1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tm6sf2Q8R1J1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Tm6sf2Q8R1J1 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.92■■□□□ 1.26
Tm6sf2Q8R1J1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tm6sf2Q8R1J1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.91■■□□□ 1.26
Tm6sf2Q8R1J1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tm6sf2Q8R1J1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tm6sf2Q8R1J1 Gm6821-201ENSMUST00000107540 542 ntBASIC22.89■■□□□ 1.25
Tm6sf2Q8R1J1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tm6sf2Q8R1J1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tm6sf2Q8R1J1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tm6sf2Q8R1J1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Tm6sf2Q8R1J1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tm6sf2Q8R1J1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tm6sf2Q8R1J1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tm6sf2Q8R1J1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Tm6sf2Q8R1J1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Tm6sf2Q8R1J1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tm6sf2Q8R1J1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.85■■□□□ 1.25
Tm6sf2Q8R1J1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tm6sf2Q8R1J1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tm6sf2Q8R1J1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Tm6sf2Q8R1J1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.83■■□□□ 1.25
Tm6sf2Q8R1J1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tm6sf2Q8R1J1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Tm6sf2Q8R1J1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Tm6sf2Q8R1J1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tm6sf2Q8R1J1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tm6sf2Q8R1J1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tm6sf2Q8R1J1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Tm6sf2Q8R1J1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Nkain2-201ENSMUST00000092602 558 ntBASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Tm6sf2Q8R1J1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tm6sf2Q8R1J1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Tm6sf2Q8R1J1 Gm8503-201ENSMUST00000118131 455 ntBASIC22.8■■□□□ 1.24
Tm6sf2Q8R1J1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tm6sf2Q8R1J1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tm6sf2Q8R1J1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tm6sf2Q8R1J1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tm6sf2Q8R1J1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tm6sf2Q8R1J1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tm6sf2Q8R1J1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Tm6sf2Q8R1J1 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.78■■□□□ 1.24
Tm6sf2Q8R1J1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.78■■□□□ 1.24
Tm6sf2Q8R1J1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.77■■□□□ 1.24
Tm6sf2Q8R1J1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tm6sf2Q8R1J1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Tm6sf2Q8R1J1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Tm6sf2Q8R1J1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tm6sf2Q8R1J1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tm6sf2Q8R1J1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tm6sf2Q8R1J1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Tm6sf2Q8R1J1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tm6sf2Q8R1J1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Tm6sf2Q8R1J1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.74■■□□□ 1.23
Tm6sf2Q8R1J1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Tm6sf2Q8R1J1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Tm6sf2Q8R1J1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
Tm6sf2Q8R1J1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tm6sf2Q8R1J1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tm6sf2Q8R1J1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tm6sf2Q8R1J1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tm6sf2Q8R1J1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tm6sf2Q8R1J1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tm6sf2Q8R1J1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tm6sf2Q8R1J1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Tm6sf2Q8R1J1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
Tm6sf2Q8R1J1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.69■■□□□ 1.22
Tm6sf2Q8R1J1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.69■■□□□ 1.22
Tm6sf2Q8R1J1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.69■■□□□ 1.22
Tm6sf2Q8R1J1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tm6sf2Q8R1J1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
Tm6sf2Q8R1J1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tm6sf2Q8R1J1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.66■■□□□ 1.22
Tm6sf2Q8R1J1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tm6sf2Q8R1J1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tm6sf2Q8R1J1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.64■■□□□ 1.21
Tm6sf2Q8R1J1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tm6sf2Q8R1J1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Tm6sf2Q8R1J1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.62■■□□□ 1.21
Tm6sf2Q8R1J1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tm6sf2Q8R1J1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tm6sf2Q8R1J1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.6■■□□□ 1.21
Tm6sf2Q8R1J1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms