Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.48■■■□□ 2.15
Pdlim2Q8R1G6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pdlim2Q8R1G6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pdlim2Q8R1G6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Pdlim2Q8R1G6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pdlim2Q8R1G6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pdlim2Q8R1G6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pdlim2Q8R1G6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Pdlim2Q8R1G6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pdlim2Q8R1G6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pdlim2Q8R1G6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.44■■■□□ 2.14
Pdlim2Q8R1G6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Pdlim2Q8R1G6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pdlim2Q8R1G6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pdlim2Q8R1G6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Pdlim2Q8R1G6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.42■■■□□ 2.14
Pdlim2Q8R1G6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pdlim2Q8R1G6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.41■■■□□ 2.14
Pdlim2Q8R1G6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pdlim2Q8R1G6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pdlim2Q8R1G6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pdlim2Q8R1G6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pdlim2Q8R1G6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Pdlim2Q8R1G6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pdlim2Q8R1G6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pdlim2Q8R1G6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.37■■■□□ 2.13
Pdlim2Q8R1G6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pdlim2Q8R1G6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
Pdlim2Q8R1G6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pdlim2Q8R1G6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.35■■■□□ 2.13
Pdlim2Q8R1G6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pdlim2Q8R1G6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Pdlim2Q8R1G6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Pdlim2Q8R1G6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pdlim2Q8R1G6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pdlim2Q8R1G6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pdlim2Q8R1G6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pdlim2Q8R1G6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pdlim2Q8R1G6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pdlim2Q8R1G6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pdlim2Q8R1G6 Rab21-202ENSMUST00000218831 843 ntBASIC28.3■■■□□ 2.12
Pdlim2Q8R1G6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Pdlim2Q8R1G6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Pdlim2Q8R1G6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.29■■■□□ 2.12
Pdlim2Q8R1G6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pdlim2Q8R1G6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pdlim2Q8R1G6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pdlim2Q8R1G6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.25■■■□□ 2.11
Pdlim2Q8R1G6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pdlim2Q8R1G6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pdlim2Q8R1G6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pdlim2Q8R1G6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pdlim2Q8R1G6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
Pdlim2Q8R1G6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pdlim2Q8R1G6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Pdlim2Q8R1G6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Pdlim2Q8R1G6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pdlim2Q8R1G6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Pdlim2Q8R1G6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pdlim2Q8R1G6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
Pdlim2Q8R1G6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pdlim2Q8R1G6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
Pdlim2Q8R1G6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pdlim2Q8R1G6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Pdlim2Q8R1G6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pdlim2Q8R1G6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pdlim2Q8R1G6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC28.16■■■□□ 2.1
Pdlim2Q8R1G6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.15■■■□□ 2.1
Pdlim2Q8R1G6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Pdlim2Q8R1G6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pdlim2Q8R1G6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pdlim2Q8R1G6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pdlim2Q8R1G6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pdlim2Q8R1G6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pdlim2Q8R1G6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Pdlim2Q8R1G6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.11■■■□□ 2.09
Pdlim2Q8R1G6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdlim2Q8R1G6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdlim2Q8R1G6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdlim2Q8R1G6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdlim2Q8R1G6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Pdlim2Q8R1G6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pdlim2Q8R1G6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pdlim2Q8R1G6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.08■■■□□ 2.09
Pdlim2Q8R1G6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pdlim2Q8R1G6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.07■■■□□ 2.08
Pdlim2Q8R1G6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.07■■■□□ 2.08
Pdlim2Q8R1G6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pdlim2Q8R1G6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pdlim2Q8R1G6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
Pdlim2Q8R1G6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pdlim2Q8R1G6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
Pdlim2Q8R1G6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Pdlim2Q8R1G6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pdlim2Q8R1G6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms