Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trnt1Q8K1J6 Gm24970-201ENSMUST00000175582 82 ntBASIC23.62■■□□□ 1.37
Trnt1Q8K1J6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trnt1Q8K1J6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trnt1Q8K1J6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trnt1Q8K1J6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.61■■□□□ 1.37
Trnt1Q8K1J6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trnt1Q8K1J6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.6■■□□□ 1.37
Trnt1Q8K1J6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trnt1Q8K1J6 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.59■■□□□ 1.37
Trnt1Q8K1J6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trnt1Q8K1J6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trnt1Q8K1J6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trnt1Q8K1J6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trnt1Q8K1J6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.58■■□□□ 1.37
Trnt1Q8K1J6 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.58■■□□□ 1.37
Trnt1Q8K1J6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Trnt1Q8K1J6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.57■■□□□ 1.36
Trnt1Q8K1J6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trnt1Q8K1J6 Gm45855-201ENSMUST00000212546 880 ntBASIC23.55■■□□□ 1.36
Trnt1Q8K1J6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trnt1Q8K1J6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trnt1Q8K1J6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.52■■□□□ 1.36
Trnt1Q8K1J6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trnt1Q8K1J6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trnt1Q8K1J6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trnt1Q8K1J6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.51■■□□□ 1.35
Trnt1Q8K1J6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
Trnt1Q8K1J6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trnt1Q8K1J6 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.5■■□□□ 1.35
Trnt1Q8K1J6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trnt1Q8K1J6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trnt1Q8K1J6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Trnt1Q8K1J6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trnt1Q8K1J6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trnt1Q8K1J6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trnt1Q8K1J6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trnt1Q8K1J6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trnt1Q8K1J6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trnt1Q8K1J6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trnt1Q8K1J6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trnt1Q8K1J6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trnt1Q8K1J6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Trnt1Q8K1J6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trnt1Q8K1J6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trnt1Q8K1J6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trnt1Q8K1J6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trnt1Q8K1J6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.42■■□□□ 1.34
Trnt1Q8K1J6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trnt1Q8K1J6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trnt1Q8K1J6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.41■■□□□ 1.34
Trnt1Q8K1J6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.41■■□□□ 1.34
Trnt1Q8K1J6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Trnt1Q8K1J6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.41■■□□□ 1.34
Trnt1Q8K1J6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trnt1Q8K1J6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trnt1Q8K1J6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trnt1Q8K1J6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Trnt1Q8K1J6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Trnt1Q8K1J6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trnt1Q8K1J6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trnt1Q8K1J6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
Trnt1Q8K1J6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trnt1Q8K1J6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trnt1Q8K1J6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trnt1Q8K1J6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trnt1Q8K1J6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trnt1Q8K1J6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trnt1Q8K1J6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trnt1Q8K1J6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trnt1Q8K1J6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trnt1Q8K1J6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trnt1Q8K1J6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trnt1Q8K1J6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnt1Q8K1J6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trnt1Q8K1J6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trnt1Q8K1J6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trnt1Q8K1J6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trnt1Q8K1J6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trnt1Q8K1J6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Trnt1Q8K1J6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trnt1Q8K1J6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnt1Q8K1J6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnt1Q8K1J6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.27■■□□□ 1.32
Trnt1Q8K1J6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnt1Q8K1J6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trnt1Q8K1J6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.25■■□□□ 1.31
Trnt1Q8K1J6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trnt1Q8K1J6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnt1Q8K1J6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnt1Q8K1J6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trnt1Q8K1J6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnt1Q8K1J6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trnt1Q8K1J6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trnt1Q8K1J6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trnt1Q8K1J6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Trnt1Q8K1J6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trnt1Q8K1J6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trnt1Q8K1J6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trnt1Q8K1J6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms