Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap54Q8C6S9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap54Q8C6S9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap54Q8C6S9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cfap54Q8C6S9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cfap54Q8C6S9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.08■■□□□ 1.44
Cfap54Q8C6S9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.07■■□□□ 1.44
Cfap54Q8C6S9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap54Q8C6S9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap54Q8C6S9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cfap54Q8C6S9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap54Q8C6S9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cfap54Q8C6S9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap54Q8C6S9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cfap54Q8C6S9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Cfap54Q8C6S9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cfap54Q8C6S9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.02■■□□□ 1.44
Cfap54Q8C6S9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfap54Q8C6S9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cfap54Q8C6S9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24■■□□□ 1.43
Cfap54Q8C6S9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24■■□□□ 1.43
Cfap54Q8C6S9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cfap54Q8C6S9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24■■□□□ 1.43
Cfap54Q8C6S9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cfap54Q8C6S9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cfap54Q8C6S9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Cfap54Q8C6S9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cfap54Q8C6S9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.96■■□□□ 1.43
Cfap54Q8C6S9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cfap54Q8C6S9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.96■■□□□ 1.43
Cfap54Q8C6S9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.95■■□□□ 1.43
Cfap54Q8C6S9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap54Q8C6S9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap54Q8C6S9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Cfap54Q8C6S9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cfap54Q8C6S9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap54Q8C6S9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cfap54Q8C6S9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.92■■□□□ 1.42
Cfap54Q8C6S9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cfap54Q8C6S9 Gm6311-201ENSMUST00000073790 878 ntBASIC23.92■■□□□ 1.42
Cfap54Q8C6S9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap54Q8C6S9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap54Q8C6S9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cfap54Q8C6S9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Cfap54Q8C6S9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.9■■□□□ 1.42
Cfap54Q8C6S9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cfap54Q8C6S9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap54Q8C6S9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cfap54Q8C6S9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.88■■□□□ 1.41
Cfap54Q8C6S9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.86■■□□□ 1.41
Cfap54Q8C6S9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Cfap54Q8C6S9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cfap54Q8C6S9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cfap54Q8C6S9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.85■■□□□ 1.41
Cfap54Q8C6S9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Cfap54Q8C6S9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfap54Q8C6S9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.84■■□□□ 1.41
Cfap54Q8C6S9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap54Q8C6S9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Cfap54Q8C6S9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cfap54Q8C6S9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.82■■□□□ 1.4
Cfap54Q8C6S9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.81■■□□□ 1.4
Cfap54Q8C6S9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cfap54Q8C6S9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap54Q8C6S9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfap54Q8C6S9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cfap54Q8C6S9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.77■■□□□ 1.4
Cfap54Q8C6S9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap54Q8C6S9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cfap54Q8C6S9 Gm15039-201ENSMUST00000118914 875 ntBASIC23.74■■□□□ 1.39
Cfap54Q8C6S9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap54Q8C6S9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfap54Q8C6S9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cfap54Q8C6S9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cfap54Q8C6S9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfap54Q8C6S9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Cfap54Q8C6S9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cfap54Q8C6S9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cfap54Q8C6S9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.68■■□□□ 1.38
Cfap54Q8C6S9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap54Q8C6S9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap54Q8C6S9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Cfap54Q8C6S9 Gm4799-201ENSMUST00000095396 657 ntBASIC23.67■■□□□ 1.38
Cfap54Q8C6S9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap54Q8C6S9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms