Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20■□□□□ 0.79
Tsen54Q8C2A2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tsen54Q8C2A2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20■□□□□ 0.79
Tsen54Q8C2A2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tsen54Q8C2A2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.99■□□□□ 0.79
Tsen54Q8C2A2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tsen54Q8C2A2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tsen54Q8C2A2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tsen54Q8C2A2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tsen54Q8C2A2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tsen54Q8C2A2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tsen54Q8C2A2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tsen54Q8C2A2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tsen54Q8C2A2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tsen54Q8C2A2 Peli2-204ENSMUST00000226513 1320 ntBASIC19.95■□□□□ 0.78
Tsen54Q8C2A2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tsen54Q8C2A2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tsen54Q8C2A2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tsen54Q8C2A2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Tsen54Q8C2A2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tsen54Q8C2A2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tsen54Q8C2A2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tsen54Q8C2A2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tsen54Q8C2A2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tsen54Q8C2A2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tsen54Q8C2A2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tsen54Q8C2A2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tsen54Q8C2A2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tsen54Q8C2A2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tsen54Q8C2A2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Tsen54Q8C2A2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tsen54Q8C2A2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tsen54Q8C2A2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tsen54Q8C2A2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tsen54Q8C2A2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.83■□□□□ 0.77
Tsen54Q8C2A2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tsen54Q8C2A2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tsen54Q8C2A2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tsen54Q8C2A2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.83■□□□□ 0.76
Tsen54Q8C2A2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tsen54Q8C2A2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.82■□□□□ 0.76
Tsen54Q8C2A2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tsen54Q8C2A2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tsen54Q8C2A2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tsen54Q8C2A2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tsen54Q8C2A2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tsen54Q8C2A2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tsen54Q8C2A2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tsen54Q8C2A2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tsen54Q8C2A2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tsen54Q8C2A2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.79■□□□□ 0.76
Tsen54Q8C2A2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsen54Q8C2A2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsen54Q8C2A2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tsen54Q8C2A2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tsen54Q8C2A2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsen54Q8C2A2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tsen54Q8C2A2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Tsen54Q8C2A2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tsen54Q8C2A2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tsen54Q8C2A2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsen54Q8C2A2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsen54Q8C2A2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tsen54Q8C2A2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsen54Q8C2A2 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.74■□□□□ 0.75
Tsen54Q8C2A2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tsen54Q8C2A2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tsen54Q8C2A2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tsen54Q8C2A2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.72■□□□□ 0.75
Tsen54Q8C2A2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsen54Q8C2A2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsen54Q8C2A2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms