Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ppp1r3eQ8BRJ4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ppp1r3eQ8BRJ4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ppp1r3eQ8BRJ4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ppp1r3eQ8BRJ4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ppp1r3eQ8BRJ4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ppp1r3eQ8BRJ4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ppp1r3eQ8BRJ4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Ppp1r3eQ8BRJ4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ppp1r3eQ8BRJ4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.85■■□□□ 1.25
Ppp1r3eQ8BRJ4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ppp1r3eQ8BRJ4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ppp1r3eQ8BRJ4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Ppp1r3eQ8BRJ4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Ppp1r3eQ8BRJ4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ppp1r3eQ8BRJ4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ppp1r3eQ8BRJ4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ppp1r3eQ8BRJ4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ppp1r3eQ8BRJ4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ppp1r3eQ8BRJ4 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.81■■□□□ 1.24
Ppp1r3eQ8BRJ4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ppp1r3eQ8BRJ4 Zfp131-205ENSMUST00000223812 663 ntBASIC22.8■■□□□ 1.24
Ppp1r3eQ8BRJ4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ppp1r3eQ8BRJ4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ppp1r3eQ8BRJ4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ppp1r3eQ8BRJ4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.78■■□□□ 1.24
Ppp1r3eQ8BRJ4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Ppp1r3eQ8BRJ4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ppp1r3eQ8BRJ4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ppp1r3eQ8BRJ4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ppp1r3eQ8BRJ4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.76■■□□□ 1.23
Ppp1r3eQ8BRJ4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ppp1r3eQ8BRJ4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ppp1r3eQ8BRJ4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ppp1r3eQ8BRJ4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Ppp1r3eQ8BRJ4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ppp1r3eQ8BRJ4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ppp1r3eQ8BRJ4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ppp1r3eQ8BRJ4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ppp1r3eQ8BRJ4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ppp1r3eQ8BRJ4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ppp1r3eQ8BRJ4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ppp1r3eQ8BRJ4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ppp1r3eQ8BRJ4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ppp1r3eQ8BRJ4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ppp1r3eQ8BRJ4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ppp1r3eQ8BRJ4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ppp1r3eQ8BRJ4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ppp1r3eQ8BRJ4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.65■■□□□ 1.22
Ppp1r3eQ8BRJ4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ppp1r3eQ8BRJ4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ppp1r3eQ8BRJ4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ppp1r3eQ8BRJ4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ppp1r3eQ8BRJ4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ppp1r3eQ8BRJ4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ppp1r3eQ8BRJ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ppp1r3eQ8BRJ4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.61■■□□□ 1.21
Ppp1r3eQ8BRJ4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ppp1r3eQ8BRJ4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ppp1r3eQ8BRJ4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ppp1r3eQ8BRJ4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ppp1r3eQ8BRJ4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ppp1r3eQ8BRJ4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ppp1r3eQ8BRJ4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ppp1r3eQ8BRJ4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ppp1r3eQ8BRJ4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ppp1r3eQ8BRJ4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ppp1r3eQ8BRJ4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ppp1r3eQ8BRJ4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ppp1r3eQ8BRJ4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.56■■□□□ 1.2
Ppp1r3eQ8BRJ4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ppp1r3eQ8BRJ4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ppp1r3eQ8BRJ4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ppp1r3eQ8BRJ4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.54■■□□□ 1.2
Ppp1r3eQ8BRJ4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.54■■□□□ 1.2
Ppp1r3eQ8BRJ4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ppp1r3eQ8BRJ4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ppp1r3eQ8BRJ4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ppp1r3eQ8BRJ4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ppp1r3eQ8BRJ4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ppp1r3eQ8BRJ4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ppp1r3eQ8BRJ4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ppp1r3eQ8BRJ4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms