Protein–RNA interactions for Protein: Q80SW5

Etd, ETD, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EtdQ80SW5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EtdQ80SW5 Gm25238-201ENSMUST00000174914 89 ntBASIC18.89■□□□□ 0.61
EtdQ80SW5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.89■□□□□ 0.61
EtdQ80SW5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
EtdQ80SW5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
EtdQ80SW5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EtdQ80SW5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.88■□□□□ 0.61
EtdQ80SW5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EtdQ80SW5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EtdQ80SW5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EtdQ80SW5 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.87■□□□□ 0.61
EtdQ80SW5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EtdQ80SW5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
EtdQ80SW5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EtdQ80SW5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
EtdQ80SW5 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.84■□□□□ 0.61
EtdQ80SW5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EtdQ80SW5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
EtdQ80SW5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
EtdQ80SW5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.83■□□□□ 0.61
EtdQ80SW5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
EtdQ80SW5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EtdQ80SW5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EtdQ80SW5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EtdQ80SW5 Rab21-202ENSMUST00000218831 843 ntBASIC18.82■□□□□ 0.6
EtdQ80SW5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
EtdQ80SW5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EtdQ80SW5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EtdQ80SW5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EtdQ80SW5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EtdQ80SW5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EtdQ80SW5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EtdQ80SW5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EtdQ80SW5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EtdQ80SW5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EtdQ80SW5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EtdQ80SW5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EtdQ80SW5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EtdQ80SW5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EtdQ80SW5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EtdQ80SW5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
EtdQ80SW5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.77■□□□□ 0.6
EtdQ80SW5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
EtdQ80SW5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EtdQ80SW5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.75■□□□□ 0.59
EtdQ80SW5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EtdQ80SW5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EtdQ80SW5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EtdQ80SW5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EtdQ80SW5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EtdQ80SW5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EtdQ80SW5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
EtdQ80SW5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
EtdQ80SW5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EtdQ80SW5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EtdQ80SW5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EtdQ80SW5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EtdQ80SW5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EtdQ80SW5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EtdQ80SW5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EtdQ80SW5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EtdQ80SW5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EtdQ80SW5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
EtdQ80SW5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EtdQ80SW5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.7■□□□□ 0.58
EtdQ80SW5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EtdQ80SW5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EtdQ80SW5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EtdQ80SW5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EtdQ80SW5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EtdQ80SW5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EtdQ80SW5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EtdQ80SW5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EtdQ80SW5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EtdQ80SW5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EtdQ80SW5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EtdQ80SW5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.66■□□□□ 0.58
EtdQ80SW5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EtdQ80SW5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EtdQ80SW5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EtdQ80SW5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EtdQ80SW5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EtdQ80SW5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EtdQ80SW5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EtdQ80SW5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EtdQ80SW5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EtdQ80SW5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EtdQ80SW5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EtdQ80SW5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EtdQ80SW5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EtdQ80SW5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EtdQ80SW5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EtdQ80SW5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EtdQ80SW5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms