Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc46a1Q6PEM8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc46a1Q6PEM8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc46a1Q6PEM8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc46a1Q6PEM8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.39■■□□□ 1.01
Slc46a1Q6PEM8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc46a1Q6PEM8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Slc46a1Q6PEM8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc46a1Q6PEM8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc46a1Q6PEM8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc46a1Q6PEM8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.36■■□□□ 1.01
Slc46a1Q6PEM8 Zxda-201ENSMUST00000117281 2621 ntBASIC21.36■■□□□ 1.01
Slc46a1Q6PEM8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.35■■□□□ 1.01
Slc46a1Q6PEM8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Slc46a1Q6PEM8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a1Q6PEM8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a1Q6PEM8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a1Q6PEM8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a1Q6PEM8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.33■■□□□ 1.01
Slc46a1Q6PEM8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc46a1Q6PEM8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Slc46a1Q6PEM8 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.32■■□□□ 1
Slc46a1Q6PEM8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.31■■□□□ 1
Slc46a1Q6PEM8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc46a1Q6PEM8 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.31■■□□□ 1
Slc46a1Q6PEM8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Slc46a1Q6PEM8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Slc46a1Q6PEM8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a1Q6PEM8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc46a1Q6PEM8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a1Q6PEM8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a1Q6PEM8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc46a1Q6PEM8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.27■■□□□ 1
Slc46a1Q6PEM8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc46a1Q6PEM8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc46a1Q6PEM8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc46a1Q6PEM8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc46a1Q6PEM8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Slc46a1Q6PEM8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc46a1Q6PEM8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc46a1Q6PEM8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc46a1Q6PEM8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc46a1Q6PEM8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a1Q6PEM8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a1Q6PEM8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a1Q6PEM8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a1Q6PEM8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc46a1Q6PEM8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc46a1Q6PEM8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.22■□□□□ 0.99
Slc46a1Q6PEM8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.22■□□□□ 0.99
Slc46a1Q6PEM8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc46a1Q6PEM8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc46a1Q6PEM8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Slc46a1Q6PEM8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.2■□□□□ 0.98
Slc46a1Q6PEM8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc46a1Q6PEM8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc46a1Q6PEM8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Slc46a1Q6PEM8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc46a1Q6PEM8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
Slc46a1Q6PEM8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc46a1Q6PEM8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.15■□□□□ 0.98
Slc46a1Q6PEM8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
Slc46a1Q6PEM8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a1Q6PEM8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc46a1Q6PEM8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc46a1Q6PEM8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc46a1Q6PEM8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc46a1Q6PEM8 Gm7432-201ENSMUST00000210343 879 ntBASIC21.13■□□□□ 0.97
Slc46a1Q6PEM8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.13■□□□□ 0.97
Slc46a1Q6PEM8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a1Q6PEM8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc46a1Q6PEM8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc46a1Q6PEM8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a1Q6PEM8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc46a1Q6PEM8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a1Q6PEM8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc46a1Q6PEM8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc46a1Q6PEM8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a1Q6PEM8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc46a1Q6PEM8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc46a1Q6PEM8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc46a1Q6PEM8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc46a1Q6PEM8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc46a1Q6PEM8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc46a1Q6PEM8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.04■□□□□ 0.96
Slc46a1Q6PEM8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a1Q6PEM8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a1Q6PEM8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc46a1Q6PEM8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc46a1Q6PEM8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc46a1Q6PEM8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc46a1Q6PEM8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.03■□□□□ 0.96
Slc46a1Q6PEM8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc46a1Q6PEM8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a1Q6PEM8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a1Q6PEM8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.02■□□□□ 0.96
Slc46a1Q6PEM8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a1Q6PEM8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc46a1Q6PEM8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a1Q6PEM8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms