Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp50Q6P8X6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Usp50Q6P8X6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Usp50Q6P8X6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Usp50Q6P8X6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.48■■■□□ 2.15
Usp50Q6P8X6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Usp50Q6P8X6 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.47■■■□□ 2.15
Usp50Q6P8X6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Usp50Q6P8X6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.45■■■□□ 2.14
Usp50Q6P8X6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Usp50Q6P8X6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Usp50Q6P8X6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Usp50Q6P8X6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Usp50Q6P8X6 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.43■■■□□ 2.14
Usp50Q6P8X6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Usp50Q6P8X6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.43■■■□□ 2.14
Usp50Q6P8X6 Gm6821-201ENSMUST00000107540 542 ntBASIC28.43■■■□□ 2.14
Usp50Q6P8X6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.43■■■□□ 2.14
Usp50Q6P8X6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Usp50Q6P8X6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Usp50Q6P8X6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Usp50Q6P8X6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp50Q6P8X6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp50Q6P8X6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.41■■■□□ 2.14
Usp50Q6P8X6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Usp50Q6P8X6 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.39■■■□□ 2.14
Usp50Q6P8X6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Usp50Q6P8X6 Gm8503-201ENSMUST00000118131 455 ntBASIC28.38■■■□□ 2.13
Usp50Q6P8X6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Usp50Q6P8X6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Usp50Q6P8X6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Usp50Q6P8X6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp50Q6P8X6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.36■■■□□ 2.13
Usp50Q6P8X6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp50Q6P8X6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Usp50Q6P8X6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp50Q6P8X6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Usp50Q6P8X6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Usp50Q6P8X6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.35■■■□□ 2.13
Usp50Q6P8X6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Usp50Q6P8X6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Usp50Q6P8X6 Nkain2-201ENSMUST00000092602 558 ntBASIC28.33■■■□□ 2.13
Usp50Q6P8X6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Usp50Q6P8X6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Usp50Q6P8X6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Usp50Q6P8X6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp50Q6P8X6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp50Q6P8X6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp50Q6P8X6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Usp50Q6P8X6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Usp50Q6P8X6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Usp50Q6P8X6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp50Q6P8X6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp50Q6P8X6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Usp50Q6P8X6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Usp50Q6P8X6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.23■■■□□ 2.11
Usp50Q6P8X6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.23■■■□□ 2.11
Usp50Q6P8X6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Usp50Q6P8X6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Usp50Q6P8X6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Usp50Q6P8X6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp50Q6P8X6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Usp50Q6P8X6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.22■■■□□ 2.11
Usp50Q6P8X6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Usp50Q6P8X6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Usp50Q6P8X6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Usp50Q6P8X6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Usp50Q6P8X6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.2■■■□□ 2.1
Usp50Q6P8X6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Usp50Q6P8X6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.19■■■□□ 2.1
Usp50Q6P8X6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.18■■■□□ 2.1
Usp50Q6P8X6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
Usp50Q6P8X6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Usp50Q6P8X6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Usp50Q6P8X6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Usp50Q6P8X6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Usp50Q6P8X6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.16■■■□□ 2.1
Usp50Q6P8X6 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.15■■■□□ 2.1
Usp50Q6P8X6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.15■■■□□ 2.1
Usp50Q6P8X6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.14■■■□□ 2.1
Usp50Q6P8X6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Usp50Q6P8X6 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.12■■■□□ 2.09
Usp50Q6P8X6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp50Q6P8X6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp50Q6P8X6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.1■■■□□ 2.09
Usp50Q6P8X6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp50Q6P8X6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp50Q6P8X6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.09■■■□□ 2.09
Usp50Q6P8X6 Amer2-203ENSMUST00000225247 2662 ntBASIC28.09■■■□□ 2.09
Usp50Q6P8X6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Usp50Q6P8X6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Usp50Q6P8X6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Usp50Q6P8X6 Gm30023-201ENSMUST00000197970 889 ntBASIC28.05■■■□□ 2.08
Usp50Q6P8X6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.04■■■□□ 2.08
Usp50Q6P8X6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms