Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ltn1Q6A009 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.01■■■□□ 2.39
Ltn1Q6A009 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Ltn1Q6A009 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30■■■□□ 2.39
Ltn1Q6A009 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ltn1Q6A009 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ltn1Q6A009 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ltn1Q6A009 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ltn1Q6A009 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ltn1Q6A009 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ltn1Q6A009 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ltn1Q6A009 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ltn1Q6A009 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Ltn1Q6A009 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ltn1Q6A009 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.94■■■□□ 2.38
Ltn1Q6A009 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.94■■■□□ 2.38
Ltn1Q6A009 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ltn1Q6A009 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.94■■■□□ 2.38
Ltn1Q6A009 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
Ltn1Q6A009 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ltn1Q6A009 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ltn1Q6A009 Gm11175-201ENSMUST00000116172 543 ntBASIC29.91■■■□□ 2.38
Ltn1Q6A009 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Ltn1Q6A009 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ltn1Q6A009 Mir6538-201ENSMUST00000183713 110 ntBASIC29.87■■■□□ 2.37
Ltn1Q6A009 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ltn1Q6A009 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ltn1Q6A009 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.85■■■□□ 2.37
Ltn1Q6A009 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Ltn1Q6A009 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Ltn1Q6A009 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ltn1Q6A009 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Ltn1Q6A009 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ltn1Q6A009 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Ltn1Q6A009 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.81■■■□□ 2.36
Ltn1Q6A009 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ltn1Q6A009 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Ltn1Q6A009 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ltn1Q6A009 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.79■■■□□ 2.36
Ltn1Q6A009 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.78■■■□□ 2.36
Ltn1Q6A009 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ltn1Q6A009 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Ltn1Q6A009 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ltn1Q6A009 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ltn1Q6A009 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ltn1Q6A009 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ltn1Q6A009 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ltn1Q6A009 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Ltn1Q6A009 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ltn1Q6A009 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ltn1Q6A009 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
Ltn1Q6A009 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.7■■■□□ 2.35
Ltn1Q6A009 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.7■■■□□ 2.34
Ltn1Q6A009 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ltn1Q6A009 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ltn1Q6A009 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ltn1Q6A009 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ltn1Q6A009 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Ltn1Q6A009 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.68■■■□□ 2.34
Ltn1Q6A009 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ltn1Q6A009 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Ltn1Q6A009 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.66■■■□□ 2.34
Ltn1Q6A009 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ltn1Q6A009 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ltn1Q6A009 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ltn1Q6A009 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ltn1Q6A009 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Ltn1Q6A009 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Ltn1Q6A009 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ltn1Q6A009 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ltn1Q6A009 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.62■■■□□ 2.33
Ltn1Q6A009 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
Ltn1Q6A009 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ltn1Q6A009 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ltn1Q6A009 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ltn1Q6A009 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ltn1Q6A009 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Ltn1Q6A009 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ltn1Q6A009 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ltn1Q6A009 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Ltn1Q6A009 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.55■■■□□ 2.32
Ltn1Q6A009 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Ltn1Q6A009 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Ltn1Q6A009 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Ltn1Q6A009 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ltn1Q6A009 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.52■■■□□ 2.32
Ltn1Q6A009 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.49■■■□□ 2.31
Ltn1Q6A009 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ltn1Q6A009 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ltn1Q6A009 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.47■■■□□ 2.31
Ltn1Q6A009 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ltn1Q6A009 Gm30023-201ENSMUST00000197970 889 ntBASIC29.47■■■□□ 2.31
Ltn1Q6A009 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ltn1Q6A009 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.45■■■□□ 2.31
Ltn1Q6A009 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ltn1Q6A009 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ltn1Q6A009 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ltn1Q6A009 Particl-201ENSMUST00000205370 1560 ntBASIC29.44■■■□□ 2.3
Ltn1Q6A009 Cap2-205ENSMUST00000225824 1634 ntBASIC29.43■■■□□ 2.3
Ltn1Q6A009 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.43■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 1122.9 ms