Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Xirp2Q4U4S6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Xirp2Q4U4S6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
Xirp2Q4U4S6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Xirp2Q4U4S6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Xirp2Q4U4S6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Xirp2Q4U4S6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.08■□□□□ 0.65
Xirp2Q4U4S6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Xirp2Q4U4S6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Xirp2Q4U4S6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Xirp2Q4U4S6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.06■□□□□ 0.64
Xirp2Q4U4S6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.05■□□□□ 0.64
Xirp2Q4U4S6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Xirp2Q4U4S6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.04■□□□□ 0.64
Xirp2Q4U4S6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Xirp2Q4U4S6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Xirp2Q4U4S6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Xirp2Q4U4S6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Xirp2Q4U4S6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Xirp2Q4U4S6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Xirp2Q4U4S6 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.01■□□□□ 0.63
Xirp2Q4U4S6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.01■□□□□ 0.63
Xirp2Q4U4S6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Xirp2Q4U4S6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xirp2Q4U4S6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19■□□□□ 0.63
Xirp2Q4U4S6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Xirp2Q4U4S6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Xirp2Q4U4S6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xirp2Q4U4S6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Xirp2Q4U4S6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.97■□□□□ 0.63
Xirp2Q4U4S6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xirp2Q4U4S6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xirp2Q4U4S6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.96■□□□□ 0.63
Xirp2Q4U4S6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Xirp2Q4U4S6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.95■□□□□ 0.62
Xirp2Q4U4S6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xirp2Q4U4S6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xirp2Q4U4S6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Xirp2Q4U4S6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Xirp2Q4U4S6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Xirp2Q4U4S6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xirp2Q4U4S6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xirp2Q4U4S6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xirp2Q4U4S6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xirp2Q4U4S6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xirp2Q4U4S6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.91■□□□□ 0.62
Xirp2Q4U4S6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xirp2Q4U4S6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xirp2Q4U4S6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xirp2Q4U4S6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xirp2Q4U4S6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xirp2Q4U4S6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Xirp2Q4U4S6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Xirp2Q4U4S6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Xirp2Q4U4S6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xirp2Q4U4S6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xirp2Q4U4S6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xirp2Q4U4S6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xirp2Q4U4S6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xirp2Q4U4S6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xirp2Q4U4S6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.85■□□□□ 0.61
Xirp2Q4U4S6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xirp2Q4U4S6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Xirp2Q4U4S6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Xirp2Q4U4S6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.83■□□□□ 0.61
Xirp2Q4U4S6 Gm6311-201ENSMUST00000073790 878 ntBASIC18.83■□□□□ 0.61
Xirp2Q4U4S6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xirp2Q4U4S6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xirp2Q4U4S6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xirp2Q4U4S6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xirp2Q4U4S6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.82■□□□□ 0.6
Xirp2Q4U4S6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xirp2Q4U4S6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xirp2Q4U4S6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xirp2Q4U4S6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xirp2Q4U4S6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xirp2Q4U4S6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms