Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgcaP82350 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgcaP82350 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.14■□□□□ 0.81
SgcaP82350 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SgcaP82350 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.13■□□□□ 0.81
SgcaP82350 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.13■□□□□ 0.81
SgcaP82350 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SgcaP82350 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgcaP82350 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SgcaP82350 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcaP82350 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgcaP82350 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgcaP82350 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgcaP82350 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgcaP82350 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgcaP82350 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgcaP82350 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SgcaP82350 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SgcaP82350 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
SgcaP82350 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.06■□□□□ 0.8
SgcaP82350 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgcaP82350 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgcaP82350 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcaP82350 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcaP82350 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcaP82350 Gm27322-201ENSMUST00000184007 104 ntBASIC20.04■□□□□ 0.8
SgcaP82350 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SgcaP82350 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcaP82350 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SgcaP82350 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SgcaP82350 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SgcaP82350 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SgcaP82350 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SgcaP82350 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SgcaP82350 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcaP82350 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcaP82350 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgcaP82350 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SgcaP82350 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SgcaP82350 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SgcaP82350 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SgcaP82350 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SgcaP82350 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SgcaP82350 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SgcaP82350 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SgcaP82350 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgcaP82350 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgcaP82350 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgcaP82350 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SgcaP82350 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgcaP82350 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SgcaP82350 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SgcaP82350 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SgcaP82350 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SgcaP82350 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SgcaP82350 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.96■□□□□ 0.79
SgcaP82350 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SgcaP82350 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SgcaP82350 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcaP82350 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgcaP82350 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.95■□□□□ 0.78
SgcaP82350 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgcaP82350 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SgcaP82350 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.94■□□□□ 0.78
SgcaP82350 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SgcaP82350 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SgcaP82350 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SgcaP82350 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SgcaP82350 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SgcaP82350 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.9■□□□□ 0.78
SgcaP82350 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SgcaP82350 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.9■□□□□ 0.78
SgcaP82350 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SgcaP82350 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SgcaP82350 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SgcaP82350 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SgcaP82350 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SgcaP82350 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SgcaP82350 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SgcaP82350 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SgcaP82350 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SgcaP82350 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SgcaP82350 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SgcaP82350 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SgcaP82350 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SgcaP82350 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SgcaP82350 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SgcaP82350 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SgcaP82350 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SgcaP82350 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SgcaP82350 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SgcaP82350 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SgcaP82350 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcaP82350 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcaP82350 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcaP82350 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.81■□□□□ 0.76
SgcaP82350 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SgcaP82350 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcaP82350 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcaP82350 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms