Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pdlim4P70271 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim4P70271 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.09■□□□□ 0.81
Pdlim4P70271 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim4P70271 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim4P70271 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.08■□□□□ 0.81
Pdlim4P70271 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim4P70271 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.08■□□□□ 0.8
Pdlim4P70271 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.07■□□□□ 0.8
Pdlim4P70271 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdlim4P70271 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim4P70271 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim4P70271 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pdlim4P70271 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim4P70271 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim4P70271 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.05■□□□□ 0.8
Pdlim4P70271 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim4P70271 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim4P70271 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim4P70271 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdlim4P70271 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim4P70271 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pdlim4P70271 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim4P70271 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.02■□□□□ 0.8
Pdlim4P70271 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim4P70271 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.01■□□□□ 0.79
Pdlim4P70271 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim4P70271 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.01■□□□□ 0.79
Pdlim4P70271 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20■□□□□ 0.79
Pdlim4P70271 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim4P70271 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim4P70271 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim4P70271 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim4P70271 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim4P70271 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim4P70271 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.97■□□□□ 0.79
Pdlim4P70271 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim4P70271 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdlim4P70271 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdlim4P70271 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
Pdlim4P70271 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdlim4P70271 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim4P70271 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim4P70271 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdlim4P70271 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim4P70271 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdlim4P70271 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim4P70271 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim4P70271 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim4P70271 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim4P70271 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pdlim4P70271 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim4P70271 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Pdlim4P70271 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim4P70271 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pdlim4P70271 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.89■□□□□ 0.77
Pdlim4P70271 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim4P70271 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim4P70271 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pdlim4P70271 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim4P70271 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim4P70271 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim4P70271 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.88■□□□□ 0.77
Pdlim4P70271 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim4P70271 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim4P70271 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim4P70271 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pdlim4P70271 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pdlim4P70271 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim4P70271 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim4P70271 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim4P70271 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim4P70271 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim4P70271 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim4P70271 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim4P70271 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim4P70271 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Pdlim4P70271 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.85■□□□□ 0.77
Pdlim4P70271 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim4P70271 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim4P70271 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim4P70271 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim4P70271 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim4P70271 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim4P70271 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim4P70271 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim4P70271 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim4P70271 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.82■□□□□ 0.76
Pdlim4P70271 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Pdlim4P70271 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim4P70271 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim4P70271 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Pdlim4P70271 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pdlim4P70271 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim4P70271 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pdlim4P70271 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim4P70271 Amer2-203ENSMUST00000225247 2662 ntBASIC19.78■□□□□ 0.76
Pdlim4P70271 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim4P70271 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim4P70271 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms