Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmx3P42581 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Hmx3P42581 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmx3P42581 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hmx3P42581 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Hmx3P42581 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hmx3P42581 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Hmx3P42581 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmx3P42581 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.85■□□□□ 0.77
Hmx3P42581 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmx3P42581 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmx3P42581 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmx3P42581 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmx3P42581 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmx3P42581 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmx3P42581 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.84■□□□□ 0.77
Hmx3P42581 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmx3P42581 Gm24804-201ENSMUST00000174982 85 ntBASIC19.83■□□□□ 0.77
Hmx3P42581 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmx3P42581 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmx3P42581 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmx3P42581 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmx3P42581 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmx3P42581 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmx3P42581 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmx3P42581 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmx3P42581 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.78■□□□□ 0.76
Hmx3P42581 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmx3P42581 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmx3P42581 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmx3P42581 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmx3P42581 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hmx3P42581 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmx3P42581 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmx3P42581 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hmx3P42581 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmx3P42581 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hmx3P42581 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmx3P42581 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmx3P42581 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmx3P42581 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmx3P42581 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmx3P42581 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmx3P42581 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hmx3P42581 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmx3P42581 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hmx3P42581 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmx3P42581 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmx3P42581 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmx3P42581 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmx3P42581 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmx3P42581 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmx3P42581 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmx3P42581 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmx3P42581 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmx3P42581 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmx3P42581 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hmx3P42581 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.7■□□□□ 0.74
Hmx3P42581 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmx3P42581 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hmx3P42581 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmx3P42581 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hmx3P42581 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmx3P42581 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmx3P42581 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmx3P42581 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.68■□□□□ 0.74
Hmx3P42581 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hmx3P42581 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmx3P42581 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hmx3P42581 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmx3P42581 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hmx3P42581 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmx3P42581 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmx3P42581 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmx3P42581 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmx3P42581 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmx3P42581 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.66■□□□□ 0.74
Hmx3P42581 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmx3P42581 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Hmx3P42581 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hmx3P42581 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.66■□□□□ 0.74
Hmx3P42581 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmx3P42581 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmx3P42581 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmx3P42581 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.65■□□□□ 0.74
Hmx3P42581 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmx3P42581 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmx3P42581 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmx3P42581 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmx3P42581 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmx3P42581 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Hmx3P42581 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmx3P42581 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmx3P42581 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmx3P42581 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmx3P42581 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hmx3P42581 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hmx3P42581 Gm16148-201ENSMUST00000119653 893 ntBASIC19.61■□□□□ 0.73
Hmx3P42581 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmx3P42581 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms