Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa3P35584 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa3P35584 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa3P35584 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxa3P35584 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa3P35584 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa3P35584 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa3P35584 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa3P35584 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa3P35584 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa3P35584 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa3P35584 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa3P35584 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxa3P35584 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa3P35584 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa3P35584 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa3P35584 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Foxa3P35584 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa3P35584 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa3P35584 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa3P35584 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa3P35584 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Foxa3P35584 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Foxa3P35584 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.18■□□□□ 0.82
Foxa3P35584 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa3P35584 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa3P35584 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa3P35584 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa3P35584 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.16■□□□□ 0.82
Foxa3P35584 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa3P35584 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.15■□□□□ 0.82
Foxa3P35584 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxa3P35584 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa3P35584 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.14■□□□□ 0.81
Foxa3P35584 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa3P35584 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa3P35584 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa3P35584 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.13■□□□□ 0.81
Foxa3P35584 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa3P35584 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Foxa3P35584 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxa3P35584 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Foxa3P35584 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Foxa3P35584 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Foxa3P35584 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa3P35584 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.08■□□□□ 0.81
Foxa3P35584 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.08■□□□□ 0.81
Foxa3P35584 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa3P35584 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Foxa3P35584 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxa3P35584 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Foxa3P35584 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa3P35584 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa3P35584 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa3P35584 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa3P35584 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.05■□□□□ 0.8
Foxa3P35584 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa3P35584 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa3P35584 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.03■□□□□ 0.8
Foxa3P35584 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa3P35584 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.03■□□□□ 0.8
Foxa3P35584 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.02■□□□□ 0.8
Foxa3P35584 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa3P35584 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.02■□□□□ 0.8
Foxa3P35584 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa3P35584 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa3P35584 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa3P35584 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.02■□□□□ 0.8
Foxa3P35584 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa3P35584 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa3P35584 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa3P35584 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxa3P35584 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxa3P35584 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa3P35584 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa3P35584 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa3P35584 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxa3P35584 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Foxa3P35584 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Foxa3P35584 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa3P35584 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa3P35584 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa3P35584 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.97■□□□□ 0.79
Foxa3P35584 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Foxa3P35584 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa3P35584 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa3P35584 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa3P35584 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa3P35584 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa3P35584 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa3P35584 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa3P35584 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa3P35584 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxa3P35584 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Foxa3P35584 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms