Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hes1P35428 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hes1P35428 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hes1P35428 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hes1P35428 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hes1P35428 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hes1P35428 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hes1P35428 Gm24970-201ENSMUST00000175582 82 ntBASIC19.77■□□□□ 0.76
Hes1P35428 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hes1P35428 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hes1P35428 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.76■□□□□ 0.75
Hes1P35428 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hes1P35428 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hes1P35428 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Hes1P35428 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Hes1P35428 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hes1P35428 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hes1P35428 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hes1P35428 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hes1P35428 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hes1P35428 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hes1P35428 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hes1P35428 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hes1P35428 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.72■□□□□ 0.75
Hes1P35428 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.72■□□□□ 0.75
Hes1P35428 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.72■□□□□ 0.75
Hes1P35428 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.71■□□□□ 0.75
Hes1P35428 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Hes1P35428 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hes1P35428 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hes1P35428 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hes1P35428 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Hes1P35428 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
Hes1P35428 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hes1P35428 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hes1P35428 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hes1P35428 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hes1P35428 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.69■□□□□ 0.74
Hes1P35428 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hes1P35428 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.69■□□□□ 0.74
Hes1P35428 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hes1P35428 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hes1P35428 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hes1P35428 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hes1P35428 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.67■□□□□ 0.74
Hes1P35428 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hes1P35428 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.67■□□□□ 0.74
Hes1P35428 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hes1P35428 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hes1P35428 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hes1P35428 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hes1P35428 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hes1P35428 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hes1P35428 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.65■□□□□ 0.74
Hes1P35428 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hes1P35428 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hes1P35428 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hes1P35428 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hes1P35428 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.63■□□□□ 0.73
Hes1P35428 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hes1P35428 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.63■□□□□ 0.73
Hes1P35428 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hes1P35428 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hes1P35428 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hes1P35428 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hes1P35428 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Hes1P35428 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hes1P35428 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hes1P35428 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hes1P35428 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hes1P35428 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.6■□□□□ 0.73
Hes1P35428 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.6■□□□□ 0.73
Hes1P35428 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hes1P35428 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hes1P35428 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hes1P35428 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hes1P35428 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hes1P35428 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hes1P35428 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hes1P35428 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hes1P35428 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hes1P35428 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hes1P35428 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hes1P35428 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.57■□□□□ 0.72
Hes1P35428 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hes1P35428 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.55■□□□□ 0.72
Hes1P35428 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hes1P35428 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hes1P35428 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.53■□□□□ 0.72
Hes1P35428 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hes1P35428 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hes1P35428 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.52■□□□□ 0.72
Hes1P35428 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Hes1P35428 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms