Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf9P20334 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf9P20334 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf9P20334 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf9P20334 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tnfrsf9P20334 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfrsf9P20334 Gm11599-201ENSMUST00000118720 878 ntBASIC19.39■□□□□ 0.69
Tnfrsf9P20334 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Tnfrsf9P20334 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.39■□□□□ 0.69
Tnfrsf9P20334 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf9P20334 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.38■□□□□ 0.69
Tnfrsf9P20334 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf9P20334 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf9P20334 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf9P20334 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf9P20334 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.37■□□□□ 0.69
Tnfrsf9P20334 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf9P20334 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf9P20334 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf9P20334 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf9P20334 Gm11175-201ENSMUST00000116172 543 ntBASIC19.35■□□□□ 0.69
Tnfrsf9P20334 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf9P20334 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf9P20334 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf9P20334 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf9P20334 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf9P20334 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf9P20334 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf9P20334 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tnfrsf9P20334 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfrsf9P20334 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Tnfrsf9P20334 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tnfrsf9P20334 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf9P20334 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf9P20334 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf9P20334 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf9P20334 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf9P20334 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Mir6538-201ENSMUST00000183713 110 ntBASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf9P20334 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf9P20334 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf9P20334 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.29■□□□□ 0.68
Tnfrsf9P20334 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf9P20334 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfrsf9P20334 Cap2-205ENSMUST00000225824 1634 ntBASIC19.25■□□□□ 0.67
Tnfrsf9P20334 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Tnfrsf9P20334 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf9P20334 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf9P20334 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf9P20334 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
Tnfrsf9P20334 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf9P20334 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf9P20334 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Tnfrsf9P20334 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf9P20334 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tnfrsf9P20334 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf9P20334 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf9P20334 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf9P20334 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf9P20334 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf9P20334 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf9P20334 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf9P20334 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.18■□□□□ 0.66
Tnfrsf9P20334 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf9P20334 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf9P20334 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf9P20334 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf9P20334 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf9P20334 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf9P20334 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf9P20334 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf9P20334 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf9P20334 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf9P20334 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf9P20334 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnfrsf9P20334 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
Tnfrsf9P20334 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnfrsf9P20334 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf9P20334 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms