Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.76■□□□□ 0.91
H3f3cP02301 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3f3cP02301 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H3f3cP02301 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3f3cP02301 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.73■□□□□ 0.91
H3f3cP02301 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3f3cP02301 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3f3cP02301 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3f3cP02301 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3f3cP02301 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3f3cP02301 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.71■□□□□ 0.91
H3f3cP02301 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.7■□□□□ 0.9
H3f3cP02301 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3f3cP02301 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.7■□□□□ 0.9
H3f3cP02301 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H3f3cP02301 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3f3cP02301 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.69■□□□□ 0.9
H3f3cP02301 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3f3cP02301 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3f3cP02301 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.68■□□□□ 0.9
H3f3cP02301 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
H3f3cP02301 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3f3cP02301 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3f3cP02301 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H3f3cP02301 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3f3cP02301 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3f3cP02301 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3f3cP02301 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3f3cP02301 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3f3cP02301 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3f3cP02301 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H3f3cP02301 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.65■□□□□ 0.9
H3f3cP02301 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H3f3cP02301 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3f3cP02301 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.62■□□□□ 0.89
H3f3cP02301 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3f3cP02301 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3f3cP02301 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H3f3cP02301 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H3f3cP02301 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H3f3cP02301 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3f3cP02301 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
H3f3cP02301 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3f3cP02301 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3f3cP02301 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H3f3cP02301 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.58■□□□□ 0.89
H3f3cP02301 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3f3cP02301 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
H3f3cP02301 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
H3f3cP02301 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.57■□□□□ 0.88
H3f3cP02301 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3f3cP02301 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3f3cP02301 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H3f3cP02301 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3f3cP02301 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.56■□□□□ 0.88
H3f3cP02301 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3f3cP02301 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.55■□□□□ 0.88
H3f3cP02301 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H3f3cP02301 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3f3cP02301 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3f3cP02301 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3f3cP02301 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3f3cP02301 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3f3cP02301 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3f3cP02301 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3f3cP02301 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3f3cP02301 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3f3cP02301 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3f3cP02301 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3f3cP02301 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
H3f3cP02301 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3f3cP02301 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3f3cP02301 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H3f3cP02301 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3f3cP02301 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
H3f3cP02301 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3f3cP02301 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
H3f3cP02301 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
H3f3cP02301 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
H3f3cP02301 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
H3f3cP02301 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3f3cP02301 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H3f3cP02301 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.44■□□□□ 0.86
H3f3cP02301 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
H3f3cP02301 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3cP02301 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3f3cP02301 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3f3cP02301 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3f3cP02301 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3cP02301 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3cP02301 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H3f3cP02301 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.41■□□□□ 0.86
H3f3cP02301 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms